Gene detail

Detailed information of ENSXFYP00000042952.1 in Duncanopsammia axifuga

Genomic Location: :...
NR annotation: XP_020616964.1, arf-GAP with dual PH domain-containing protein 1-like isoform X2 [Orbicella faveolata]

Gene Structure

More details in Jbrowse

Sequence

CDS

Transcript

ENSXFYT00000047912

CCGCTTCTTCAATAAAACACCTACCTCACAGATAAATACGAGAGCTTCCTGTGCTGCTGTGCACATCTATAAATGGTGACTGATAAAATGTCTTCGATTTTTCACACACGTGCAATCGTGTTCTCGTTGCTCGGCGGGAGTCTGGGTATGATAGCCCGCTAAGGAAATGACTGTCCCCTCCCCTGATCAGAAACAATTAATGCACTCAGCTGGTCAAAATGTCGGAGAAGAATCGGGCTTCGATATTAGAGCTGATGAAACAGCCTGGAAATAACACATGTGCAGATTGCGGAGCACCAAATCCTGAATGGGCTTCGGCGTCGAAGGGCCTTTTCATTTGCATCTCATGTAGCGGAATCCACAGAAATCTTGGTGCTCACGTATCTGTAGTCAAGTCGCTGAGGCTTGATACGTGGACAGTTGAAAAATTGAAGTTTATGGAAGAACATGGTAATATCAAGGGCAATGATATATGGGCCAAGAATGTGCCAGTGTTTTATAGACGACCAAAACCTACAGATCCACATGTACTCAAGGAGCAATGGATAAGAGCAAAATATGAACGGAAGGAGTTTGTTGATGGCTCACCAGAACCAAGTTATTTAAAAGGATCAATGCGAGGCTATTtaaggaaaaaaggaaaggaaaacaaCAGTTGGAATCTACGACTGTTTGTTCTATCAGCTGAGCAAAATTCACTCAGCTACTTTATTAATGACCAGGATAGAGAACCAAAATGTGCCTTTAATGTCACAGAGATCAATGTCACCTTTGCTCAAGATAGAACAAATAAGGATAACAGTTTACAGATCACTTATGTAAGAAATGGATTGACAAGAAACTACTTTGTCTACTCAGATTCTGGAAAGGAGATTGTTGATTGGTACATGGCCATCAGATCAGCAAAGCTAAAGTTATTAGGACTCAATGGTCCAAGAGCTGACCCTGTCAAGGTGAGTGCTGTGCTTACCAGGGACTTCACAATGGAGGGATTTCTTCACAAGACGGGACCAAGGGACGAACCATGGCAGAATAGATGGTTTACACTTGATGGCAGGAGACTTCTTTATTCACAAGATCCAATGGACCCTTCTGGAAAAGGCGAGTTAATTATTGGCTCACATACAGAAGGTTTTGGTATCCAAGAAGGAATAAAATCAGGGAGACATCAAGGTTTAGACTACTGTTTCACGCTGATTACACCTAGACGGGACTTTGTTTTAATGGCAAACacagaaaatgaaatgaaaatgtgGATCGATTGTTTATCTAAAGTCATAGCACAACCAATGACAGATGAAGACAAGCAAGACATGAATGAGACAAAGTCAGGaatgaaaaagttaaaaaacaagAGCTTTCTCAGTAGTTTTCGAAGGTCGTCATTCAAAGATGAGGATTCGCCATAAAACAAGCTGTTAAAGGAATACTAATTTGCAGTTTCATATGGACATATTTTCTTGGGCAGGTCCCAAGATTGCTATACGTTATTAGTATTTAAATATTAACCTACTACAAGTAAGCAAAAAAACCTGGTTATGGGTGTTCTTGGATGTGAACAGGTAGCAGGAAGAAGGGTAGCAGGCAGCTAGAGTCGAATGCCAGGATGTTGCTCAAAGCAAACATTTTGTAGAGAAAAGTGAGAGGCAGTCAAGGAATACGTGGAAACTCCTGTGTAATGTGTGACAGGCTACTAAACCACCCATCCTGTACCCTATGTACTTTATGTGTACACTGCATGAAGACACCCCTGAAAGAAAAATATGAGAGACATATGGAGCTCTGCACACAGACTACCACTCGTGACTAAACATGCTTTTTTTATAACATGTGAGAACTGTTGTGACAAGCTACAAAACCACCAGCCCTGTACCCTGCATACAGACAACCCCTGAAAGAAAAATATAGGAGACATGAACAGAACTCGATAACTGCACACAGACGACCACTTGTGACCAAATAAGCCATTTTTATAACAAAATTATTCAAAAATAGGATTTCAATATAGGGAACATTTCACCACCAAGAACTTACTCCAATTCCCTTTAGATTGTATTTCAATAATTTGTACTGAAATTGAAATGGGTTatagcagtgggacaaaatttcatAGATCTCTTGATTGGTCAATatgctgttaacattgagcctgcgatatgtaatggtcagctGCCTTACCCATCAGTATATAGTGTTGAAGGGAGGGATGGTGGGGAGTtagacgcagggggtgggggtgggggtcagTGGAGAAAAACAcacaggagaggggagggttcgAATGATTTGTATttacaagttggctcatagc

Protein

Uniprot

Uniprot term	Description
O75689	Arf-GAP with dual PH domain-containing protein 1 OS=Homo sapiens OX=9606 GN=ADAP1 PE=1 SV=2
Q9NPF8	Arf-GAP with dual PH domain-containing protein 2 OS=Homo sapiens OX=9606 GN=ADAP2 PE=1 SV=1
Q9JK15	Arf-GAP with dual PH domain-containing protein 2 OS=Rattus norvegicus OX=10116 GN=Adap2 PE=1 SV=1

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF01412	ArfGap	Putative GTPase activating protein for Arf	Domain	Interproscan
PF00169	PH	PH domain	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR001849	Domain	Pleckstrin homology domain	Interproscan
IPR038508	Homologous_superfamily	ArfGAP domain superfamily	Interproscan
IPR052589	Family	Arf-GAP with dual PH domain-containing protein	Interproscan
IPR011993	Homologous_superfamily	PH-like domain superfamily	Interproscan
IPR001164	Domain	Arf GTPase activating protein	Interproscan
IPR037278	Homologous_superfamily	ARFGAP/RecO-like zinc finger	Interproscan
IPR037849	Domain	ADAP, PH domain 1	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR46021	ARF-GAP WITH DUAL PH DOMAIN-CONTAINING PROTEIN 1-LIKE PROTEIN	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0005096	Molecular Function	GTPase activator activity	Interproscan
GO:0005547	Molecular Function	phosphatidylinositol-3,4,5-trisphosphate binding	Interproscan
GO:0005737	Cellular Component	cytoplasm	Interproscan
GO:0005886	Cellular Component	plasma membrane	Interproscan
GO:0043087	Biological Process	regulation of GTPase activity	Interproscan
GO:0043231	Cellular Component	intracellular membrane-bounded organelle	Interproscan
GO:0043547	Biological Process	positive regulation of GTPase activity	Interproscan
GO:1902936	Molecular Function	phosphatidylinositol bisphosphate binding	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
K23781	ADAP, CENTA; Arf-GAP with dual PH domain-containing protein	-	Domain-containing proteins not elsewhere classified	ko04990	deepkoala