Detailed information of ENSXFYP00000046813.1 in Duncanopsammia axifuga

Genomic Location: :...
NR annotation: CAB4007313.1, Retrovirus-related Pol poly from transposon TNT 1-94, partial [Paramuricea clavata]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
Q12088Transposon Ty1-LR1 Gag-Pol polyprotein OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) OX=559292 GN=TY1B-LR1 PE=3 SV=1

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF13976gag_pre-integrsGAG-pre-integrase domainDomainInterproscan
PF07727RVT_2Reverse transcriptase (RNA-dependent DNA polymerase)FamilyInterproscan
PF14223Retrotran_gag_2gag-polypeptide of LTR copia-typeFamilyInterproscan
PF00665rveIntegrase core domainDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR001584DomainIntegrase, catalytic coreInterproscan
IPR025724DomainGAG-pre-integrase domainInterproscan
IPR036397Homologous_superfamilyRibonuclease H superfamilyInterproscan
IPR013103DomainReverse transcriptase, RNA-dependent DNA polymeraseInterproscan
IPR012337Homologous_superfamilyRibonuclease H-like superfamilyInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR42648TRANSPOSASE, PUTATIVE-RELATEDInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0015074Biological ProcessDNA integrationInterproscan
GO:0003676Molecular Functionnucleic acid bindingInterproscan

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