Gene detail

Detailed information of ENSXFYP00000051691.1 in Duncanopsammia axifuga

Genomic Location: chr9:2137805...2176816
NR annotation: CAH3016898.1, unnamed protein product [Porites evermanni]
Species Duncanopsammia axifuga · all data for this species · gene families

Gene Structure

More details in JBrowse

Sequence

CDS

ENSXFYT00000057849

ATGTCTAGGGGTCCACCTCATCGATCTTCTAGTTACGGTTACTATGGTGGTCCACCTTTCAAGAGGCAGCGTCGCCATAGTAGTGATGAAGATATCAGCTCACCTCCAATGAATTATGGTCCGGCTTATTTTGACCCTCCATACGTAAGACATCAGGAAGTTGGACTGGGTGAATTTAACGACTTCAGTTCTGTCAGTGTTGAAAAAGATCTCAAGATTCGTGACAGAGATGGAAGTAGGAAAGATTACGAACGATCTGAATCTCACACTAGAAAGCGACAATCTTCTACTGAAGGCGCTGGTCATTTCTCTCAACACCAGACTACCAGTGCACCGACATCACCCCACACCACCATAGTGTCCCCAAGATTCTCACCTCGACATTCACCCAGGGCAAGACCTGTAACTCCTCCTTCCTCCACTGTGGCATCTCAGCCACTGACAATCACCACATCACAGCCAACTTTGTTCTCTAGAGGACCATCACTATCGTCCTCAGATGAAACTGCTTTGGTTGGCAAGGACCATCCCTTACTGATTGTTTGTCCCACATCTTCACATACTACAACTGCGTATGTTCCTGTTATGCGGGATAAGCTAAAGGATGGTACAGGCCGACCAGCCTCCTTATCGTCGTTGTCACCCCATGGAGGTGTTAATAGAAAGGAGTCGTATCCTGGTCCTGCTGTGGAAGCTATATCTCCCTCTGCTCCAGATGGTGAAGAAAAGAAAGCTGTCAAAGACACAGCATCAGATATGATGTCCAAAGATGAGCTTTTACAAGGCATGGAGAAAGTGGACAGGGAGATTGCGCAGGTCAAACTACAAATCAACAACCTTAAGAAAATGCAGAAACAACTTGAGGATGAAGCTTCTAAGCAACCTGATGAGCCCCAAAAGGAAGAAATGCCTGtccctgaacccaaacccaggAGTATTGTACAGATTATCTATGAGGAAAACAGGAAGAAAGCTGAAGCAGCTCAAGCAAGACTTGCAAAACTTGGTGTTCCTCTTCCTGGAGGAAAGCCTTTGTATAATCAGCCATCTGATCTTCCATGTTACCATGAGAACCTTAGAAAAGGTCCAGCTATCAAAGCAAAGTTGGTGAAATATTTTCAGCTGAGGAAGCAAGCCAAAGAAATAAAGAATCGGCAGTTATGTAAAGAGTACAAAACATTGAAGCAAGCTTGGCTTAAGAAAATAGAGAGACATGAAAACAACCCAAAGAGAAAGCACAAAGAAGCTAAGCTGCGTGAATTTTACGAAAAAGTGTTTCCTGAAATAAAAAAGCAGAGAGAGCAAACTGAAAGGTTTAGTAGGATGGGTTCTAGAAGTAACTGGGGAATAGTAGCTAGAAGCGAAGCTGAATTCAATGAGATTGTTGATAATCTCAATGAACAAGAGGCCAATGAACGACACATGCGCACTTTAGCTGTTGAACCACCTCCCATGTTGGAcaaggaagaaagaagagtGAAGTTTATCAACAGAAATGGCCTTATACGAGATCCACTGGCTGCTCTTAATGAAAGAAAGCACAGGAACATATGGACAGAGAAAGAGAGGCGGATATTTAAAGACAAATTTATTCACAACCCTAAGGACTTTGATTTAATTTCCTCGTTTCTTCCAGGCAAGTGTGTTGCAGATTGTATCCTGTTCTACTATCAGACAAAAAAGAAGGAACATTACAAACAGCTTTCCAGAAGACATAACCTGAAGAAACGACGCAGAGATCAATATGGAGCCAGTGGAAGTGCCCCTGCAAACAAGACAAGGCCAGGTGCTACAGAGAGCAGtgCTAAAGGTGATCATGGTGGCTCCGAGGGAGAAGAGGAGTTGGAAGAAATCACAGACTCGGCAGAAGAAAGTGAAGAGAATGAGgaactccccccaccccctgtaACCACCCCTCAAGTGGCCACGCCTGCTCCACCCCCCAGGAGACCAGATCACGTCGAGACTTCACGCTGGAgtgaaaaagaaatagaaattgcTCTTCAAGggCTGAGAGAGTGCGGTCGTGATTGGGAATCTATAGCTCGAAGGGTGGTGACAAAAACTGGAGCCCAGTGCAAGAACTTCTATTTCAATTACAAGAAAAAACTACACTTGGAAGATCTCGTAGCGGAGCATGAGAAAACAAAGATGCAGCGTGCTcagcaacagcagcaacagCAAAAACAACTGCAACGGGAACAACgggaacaacaacagcagcaacaacgacaacaacaacaaccacagCAACCACAACAAAAAGACGTTTCcagtatcccagagaagcaggaTCCTACTTTAAAGCAAACCTCAGGAGTACAACAAGCATTAAATACTTCTCATCCAAATGGAAGCAATGCTAAATCAAACAATACTGCTACCAGCAATGTGTCTACTACCAGCGGGAGAGTCTCCACTCCCGTGGTTGTAAATACAACTAGCAACCCAGTGGGACCTCCATCAACTGTACTGACTgcttctactactacttctatttCCAGTCTTCAATTAGCAGGTCCTAGAATAGCAACATCTAATTCTCCTTGCCTACCTCTAACGAGCTCAAGTTCGACTCTTTTCATGCCCACACCTGGAGTGATCGCCTCGATTGGAAGAGCTTCGCCAAATGTGGGAACTTCGCAGCCAGGACAAGTTTATTTCCGGCCTACGCTTATTGCATCCATGAAGCAAGACACACAACATTCCTCAAGATCGCCTCATCCGGAATCCATGTTTACCGGGCTGGTGTATCCCAGAGCTGTTGATCCATCCCGTTTGAGACCTGAATTTTTGGTTTCTTCACATCCAGGTCACCCACACCCAGATTCGCATCCTCTTTATCAAGGATCTCCTGTACCTAAGCAACTCCCGCACTCCACGTCCTTGCATCCTTCTTCAAATAGTGTTCATTCGACTAAAGGAGTGATACAACCGGGATCTTCCCATGTTATGACATCACATTCAGGATCTTCTCATGCTATGACATCACATCCAGGATCTTCTCATGTCACGACATCACATCCAGGATCGTCTCACACATTGACGTCACATCTGGCATCTTCACATTCTGTGACCTCACATCCAGGATCTTCACATTCTATGACTTCACATCTGGGAGCATCTCACTCTATGACATCACAACCAGGCATATTGCACACTGGCAAGTCATATTCAGAAGACTCCTACAGACACTTGTCTGCTTCCGATCCAGGCCATGTACCAGTAAGCTCCGTTGTCTTTGCCCACTCCGATCCTTCTGCAAGCTCACATACTCACAGAAGTCGTCCAAGCAGCCATTCTCCTGTCATTGTTACACCTCAAGATAAACCTCACAGTCAAGTGTCTTTCGTCAAGGAAGGTTCAGCAGTGCTACATTTGTCACACAAGCCAACTTATTTAAGCACATATCCTGGGAATATACGAGCTGAGCCACTTGTTAGGAGCAGCAAAACAGATGACGGAAGAAGAGataTCAGTTCTGATGTGCTTCACAAGCCGCCCATTGTTCCTGAGCCTGATGTGATCGTTATTGATGCCGATGATCATAAGAAGAGAATGGAAGGCTATCCACGTCTGGAGACAGCAGAAGGAAAACAAGCGTCAAGCATGTTGAGAAGATTAGCCTCTGGAGGACTTGCAGAGCACATGGCTCCTGTAACTGAACCAGTGCGACCACAAAGTCTTCCACTCACATCTAGTACCCGCCTCATGAGTCATACAGAGACAAAAGTACATCGAAGTACCACTCCGCCAAGCAGCAGCATGGCTGCTCGTCAGTCAGCACTTAACCCACCACCACCGCTTATACAAATGTCCTCTTCACGTGACAAATCATATGCTGGGACACCAGATACAGCACTGGAAAGCACCCATTCAAGAGAGGGCTTTGTACACAGCGAACCCTACCAAGAGCGGTATCTGCATGTCAGCCAGGATACCTCTGCTAGTAGAGATGTTCCACATCACACACATACTCCAGTGGATAACAGAGATGGTGAAAGGGAAAGACGAACACCAGTAGTCGAGACTGTTGATTTGACAAGGGACAGGGAGGTCAGCACATCTCCCCTTACAAGGCCAACATCAAGGTCACCTGTAGTCACCCTGAGTTCATCGTCTGCGCGTGCCACACTTCAAAAGATGGCAATGTATGCAttagcggaaacaatcagtgcCGATGCCAATGAAAAGATTGCACAGAAGAAACGGGAAGAAACGTATCTACCTCCCAGAGCACCTGATCTCAAACTCGGCGTATACGAGCAAAGTGAAGCAATACGCAAGTTCACGTCCCTTAGTAATGTTTGTGTTCCAGCTCCCCGGGAGTTTCCTGTTGGAGGTGAATATCCCAGTCAACCTTATGCACTGATGGCAATGCAGACTCAGCATCAACCCCATGTTCAGCCCCATCCTTCGGGTACATCAACCCCTCCACCATACAGCTATCCATTCCACATGGGTCATCCGATGACATCATTTCATCACCACCCTGAGCATCGCTTTCTGGTTCCAGTTGGGGTGCATCAGATACTACCCCATAGCGTCAATGGGGAGGAATTACCGGGTCATATCAAGCTCAGTGGTGCATATGCTCACCAGTATCCACAAGGAGCCAGTTATTTCCCTACTGGTATA

Transcript

ENSXFYT00000057849

AATCTGTTAGTTCTCAAAATGGCGGCTTTGTCAAAGCCCAATCTTCGGGAGCTTTACAGACAACGAGGCGATTCGTACTCTATAAACACTCATTTACGGCTAGAAAACAGATTTTAGAGCATGTCTAGGGGTCCACCTCATCGATCTTCTAGTTACGGTTACTATGGTGGTCCACCTTTCAAGAGGCAGCGTCGCCATAGTAGTGATGAAGATATCAGCTCACCTCCAATGAATTATGGTCCGGCTTATTTTGACCCTCCATACGTAAGACATCAGGAAGTTGGACTGGGTGAATTTAACGACTTCAGTTCTGTCAGTGTTGAAAAAGATCTCAAGATTCGTGACAGAGATGGAAGTAGGAAAGATTACGAACGATCTGAATCTCACACTAGAAAGCGACAATCTTCTACTGAAGGCGCTGGTCATTTCTCTCAACACCAGACTACCAGTGCACCGACATCACCCCACACCACCATAGTGTCCCCAAGATTCTCACCTCGACATTCACCCAGGGCAAGACCTGTAACTCCTCCTTCCTCCACTGTGGCATCTCAGCCACTGACAATCACCACATCACAGCCAACTTTGTTCTCTAGAGGACCATCACTATCGTCCTCAGATGAAACTGCTTTGGTTGGCAAGGACCATCCCTTACTGATTGTTTGTCCCACATCTTCACATACTACAACTGCGTATGTTCCTGTTATGCGGGATAAGCTAAAGGATGGTACAGGCCGACCAGCCTCCTTATCGTCGTTGTCACCCCATGGAGGTGTTAATAGAAAGGAGTCGTATCCTGGTCCTGCTGTGGAAGCTATATCTCCCTCTGCTCCAGATGGTGAAGAAAAGAAAGCTGTCAAAGACACAGCATCAGATATGATGTCCAAAGATGAGCTTTTACAAGGCATGGAGAAAGTGGACAGGGAGATTGCGCAGGTCAAACTACAAATCAACAACCTTAAGAAAATGCAGAAACAACTTGAGGATGAAGCTTCTAAGCAACCTGATGAGCCCCAAAAGGAAGAAATGCCTGtccctgaacccaaacccaggAGTATTGTACAGATTATCTATGAGGAAAACAGGAAGAAAGCTGAAGCAGCTCAAGCAAGACTTGCAAAACTTGGTGTTCCTCTTCCTGGAGGAAAGCCTTTGTATAATCAGCCATCTGATCTTCCATGTTACCATGAGAACCTTAGAAAAGGTCCAGCTATCAAAGCAAAGTTGGTGAAATATTTTCAGCTGAGGAAGCAAGCCAAAGAAATAAAGAATCGGCAGTTATGTAAAGAGTACAAAACATTGAAGCAAGCTTGGCTTAAGAAAATAGAGAGACATGAAAACAACCCAAAGAGAAAGCACAAAGAAGCTAAGCTGCGTGAATTTTACGAAAAAGTGTTTCCTGAAATAAAAAAGCAGAGAGAGCAAACTGAAAGGTTTAGTAGGATGGGTTCTAGAAGTAACTGGGGAATAGTAGCTAGAAGCGAAGCTGAATTCAATGAGATTGTTGATAATCTCAATGAACAAGAGGCCAATGAACGACACATGCGCACTTTAGCTGTTGAACCACCTCCCATGTTGGAcaaggaagaaagaagagtGAAGTTTATCAACAGAAATGGCCTTATACGAGATCCACTGGCTGCTCTTAATGAAAGAAAGCACAGGAACATATGGACAGAGAAAGAGAGGCGGATATTTAAAGACAAATTTATTCACAACCCTAAGGACTTTGATTTAATTTCCTCGTTTCTTCCAGGCAAGTGTGTTGCAGATTGTATCCTGTTCTACTATCAGACAAAAAAGAAGGAACATTACAAACAGCTTTCCAGAAGACATAACCTGAAGAAACGACGCAGAGATCAATATGGAGCCAGTGGAAGTGCCCCTGCAAACAAGACAAGGCCAGGTGCTACAGAGAGCAGtgCTAAAGGTGATCATGGTGGCTCCGAGGGAGAAGAGGAGTTGGAAGAAATCACAGACTCGGCAGAAGAAAGTGAAGAGAATGAGgaactccccccaccccctgtaACCACCCCTCAAGTGGCCACGCCTGCTCCACCCCCCAGGAGACCAGATCACGTCGAGACTTCACGCTGGAgtgaaaaagaaatagaaattgcTCTTCAAGggCTGAGAGAGTGCGGTCGTGATTGGGAATCTATAGCTCGAAGGGTGGTGACAAAAACTGGAGCCCAGTGCAAGAACTTCTATTTCAATTACAAGAAAAAACTACACTTGGAAGATCTCGTAGCGGAGCATGAGAAAACAAAGATGCAGCGTGCTcagcaacagcagcaacagCAAAAACAACTGCAACGGGAACAACgggaacaacaacagcagcaacaacgacaacaacaacaaccacagCAACCACAACAAAAAGACGTTTCcagtatcccagagaagcaggaTCCTACTTTAAAGCAAACCTCAGGAGTACAACAAGCATTAAATACTTCTCATCCAAATGGAAGCAATGCTAAATCAAACAATACTGCTACCAGCAATGTGTCTACTACCAGCGGGAGAGTCTCCACTCCCGTGGTTGTAAATACAACTAGCAACCCAGTGGGACCTCCATCAACTGTACTGACTgcttctactactacttctatttCCAGTCTTCAATTAGCAGGTCCTAGAATAGCAACATCTAATTCTCCTTGCCTACCTCTAACGAGCTCAAGTTCGACTCTTTTCATGCCCACACCTGGAGTGATCGCCTCGATTGGAAGAGCTTCGCCAAATGTGGGAACTTCGCAGCCAGGACAAGTTTATTTCCGGCCTACGCTTATTGCATCCATGAAGCAAGACACACAACATTCCTCAAGATCGCCTCATCCGGAATCCATGTTTACCGGGCTGGTGTATCCCAGAGCTGTTGATCCATCCCGTTTGAGACCTGAATTTTTGGTTTCTTCACATCCAGGTCACCCACACCCAGATTCGCATCCTCTTTATCAAGGATCTCCTGTACCTAAGCAACTCCCGCACTCCACGTCCTTGCATCCTTCTTCAAATAGTGTTCATTCGACTAAAGGAGTGATACAACCGGGATCTTCCCATGTTATGACATCACATTCAGGATCTTCTCATGCTATGACATCACATCCAGGATCTTCTCATGTCACGACATCACATCCAGGATCGTCTCACACATTGACGTCACATCTGGCATCTTCACATTCTGTGACCTCACATCCAGGATCTTCACATTCTATGACTTCACATCTGGGAGCATCTCACTCTATGACATCACAACCAGGCATATTGCACACTGGCAAGTCATATTCAGAAGACTCCTACAGACACTTGTCTGCTTCCGATCCAGGCCATGTACCAGTAAGCTCCGTTGTCTTTGCCCACTCCGATCCTTCTGCAAGCTCACATACTCACAGAAGTCGTCCAAGCAGCCATTCTCCTGTCATTGTTACACCTCAAGATAAACCTCACAGTCAAGTGTCTTTCGTCAAGGAAGGTTCAGCAGTGCTACATTTGTCACACAAGCCAACTTATTTAAGCACATATCCTGGGAATATACGAGCTGAGCCACTTGTTAGGAGCAGCAAAACAGATGACGGAAGAAGAGataTCAGTTCTGATGTGCTTCACAAGCCGCCCATTGTTCCTGAGCCTGATGTGATCGTTATTGATGCCGATGATCATAAGAAGAGAATGGAAGGCTATCCACGTCTGGAGACAGCAGAAGGAAAACAAGCGTCAAGCATGTTGAGAAGATTAGCCTCTGGAGGACTTGCAGAGCACATGGCTCCTGTAACTGAACCAGTGCGACCACAAAGTCTTCCACTCACATCTAGTACCCGCCTCATGAGTCATACAGAGACAAAAGTACATCGAAGTACCACTCCGCCAAGCAGCAGCATGGCTGCTCGTCAGTCAGCACTTAACCCACCACCACCGCTTATACAAATGTCCTCTTCACGTGACAAATCATATGCTGGGACACCAGATACAGCACTGGAAAGCACCCATTCAAGAGAGGGCTTTGTACACAGCGAACCCTACCAAGAGCGGTATCTGCATGTCAGCCAGGATACCTCTGCTAGTAGAGATGTTCCACATCACACACATACTCCAGTGGATAACAGAGATGGTGAAAGGGAAAGACGAACACCAGTAGTCGAGACTGTTGATTTGACAAGGGACAGGGAGGTCAGCACATCTCCCCTTACAAGGCCAACATCAAGGTCACCTGTAGTCACCCTGAGTTCATCGTCTGCGCGTGCCACACTTCAAAAGATGGCAATGTATGCAttagcggaaacaatcagtgcCGATGCCAATGAAAAGATTGCACAGAAGAAACGGGAAGAAACGTATCTACCTCCCAGAGCACCTGATCTCAAACTCGGCGTATACGAGCAAAGTGAAGCAATACGCAAGTTCACGTCCCTTAGTAATGTTTGTGTTCCAGCTCCCCGGGAGTTTCCTGTTGGAGGTGAATATCCCAGTCAACCTTATGCACTGATGGCAATGCAGACTCAGCATCAACCCCATGTTCAGCCCCATCCTTCGGGTACATCAACCCCTCCACCATACAGCTATCCATTCCACATGGGTCATCCGATGACATCATTTCATCACCACCCTGAGCATCGCTTTCTGGTTCCAGTTGGGGTGCATCAGATACTACCCCATAGCGTCAATGGGGAGGAATTACCGGGTCATATCAAGCTCAGTGGTGCATATGCTCACCAGTATCCACAAGGAGCCAGTTATTTCCCTACTGGTATAAG

Protein

UniProt (Swiss-Prot top hit)

UniProt accession	Description
O75376	Nuclear receptor corepressor 1 OS=Homo sapiens OX=9606 GN=NCOR1 PE=1 SV=2
Q60974	Nuclear receptor corepressor 1 OS=Mus musculus OX=10090 GN=Ncor1 PE=1 SV=1
Q9WU42	Nuclear receptor corepressor 2 OS=Mus musculus OX=10090 GN=Ncor2 PE=1 SV=3

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0002700 (this species only) · gene tree & orthology
Transcription factor family	MYB · all TF in this species

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF15784 all species →	GPS2_interact	G-protein pathway suppressor 2-interacting domain	Family	Interproscan
PF00249 all species →	Myb_DNA-binding	Myb-like DNA-binding domain	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR009057 all species →	Homologous_superfamily	Homeobox-like domain superfamily	Interproscan
IPR001005 all species →	Domain	SANT/Myb domain	Interproscan
IPR017884 all species →	Domain	SANT domain	Interproscan
IPR017930 all species →	Domain	Myb domain	Interproscan
IPR051571 all species →	Family	Nuclear receptor corepressor	Interproscan
IPR031557 all species →	Domain	N-CoR, GPS2-interacting domain	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR13992 all species →	NUCLEAR RECEPTOR CO-REPRESSOR RELATED NCOR	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0000790 all species →	Cellular Component	chromatin	Interproscan
GO:0006357 all species →	Biological Process	regulation of transcription by RNA polymerase II	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

No KEGG orthology assignment for ENSXFYP00000051691.1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.