Gene detail

Detailed information of ENSXFYP00000052265.1 in Duncanopsammia axifuga

Genomic Location: :...
NR annotation: MCP3888847.1, hypothetical protein [Desulfobulbaceae bacterium]

Gene Structure

More details in Jbrowse

Sequence

CDS

ENSXFYT00000058495

ATGGGGCATCTTTCGATTTCTCAGAGACAGGGCATCATTCGACTCATTCCAAAGAAAGACAAGGACccgctttatttaaaaaattggagGCCTTTGTCTTTATTAAATGTGGACTATAAAATTGCTACAAAAGTGCTAGCATTAAGACTAAAAAAGATTCTCCCTCTAATTATTAGCAGCGCACAAACTGGGTATGTTGAAGGTAGGTTTATTGGGCAAAATATCAGGTTGATTTCAGATATACTGAGCTTCACGGCTGAACAAAATATTGAAGGCATAGCTAcgtttattgattttgaaaaagcctttGACAGTTTAGAATGGGAGCTCCTGTCAAAAGCCAtagaaacctataattttggcaaTGATTTTAAAAGGTGGGTTAAAGTTATTTATCATAATATTTCAAGCTGCACGATAAACAATGGTTTTTCGTCACCCTTCTTTAGTTTATACCGTGGAGTTAGACAGGGATGTCCGCTCTCTGGCATGTTGTTTATACTTGCTGTTGAGATTTTATCGTGTGCGATCAGGTCAGATCATTCGATTGTAGGCATTCAAGTCAAAGAGAAGGAAATAAAACTCGCTCAATACGCGGATGATACAACAACTTTTGTTAAAGATGGCTTTTCGCTCGGAAGGCTCCTAGAATTATTGAACCAATTCGAAGAATGTAGCGGCTTAAAGATTAATCCAACCAAGTCAGAAGCCATCTGGCTTGGGAAAAATAGGAATAGCATAGCCAAACTCTACGATCTTAAATGGCCTCGGGAACCGGTAACCGCTTTAGGAACCGCATTTTCGTATGATAGTGACAAATGTGAAGTAAAGAACTTCCATGATAAAGCAACAAAAATCCAGAAGATGTTTAATCTATGGTCACAGAGAGATTTATCCCTTTATGGCAAGATCACAATAGCCAAAACACTTGGCCTATCTAAGATGATCTTTTCTAGTGCTTGCCTCCCCACCCCGCCTCACATTGTATTAAAAGTTGATAAGATGGTATCTGCCTTCGTTTGGAATAACAAACCTGCTAAAATTAAAAGGGAAAGCATGATCGGACCAAAAGAAGAAGGCGGTTTAGATCTTCCCGACTATGACTCTATTAAAAAGTCGTTATCTGTAGCCTGGGTCAAAAGAATGATTGAAGGGTGCGATCAAGACTGGATGGCTATTCCCTCCTTCTATTTGAACCAAGTCGGTGgaacttttatttttgaatGTAACTATGAAGTGGGTTTGCTTGATCTCGAGGGCTTGCCAGAATTTTATATAAATGTACTCAGAGCATGGTCTGAAGTAAAAAATGAATGCTCGCCCGAGGACTGGTCACAAGTTCGTGACGAAATTTTATGGAATAACAAGAATATAACTATCGAAGGAAAGTCCATTTATTATAGAGACTGGCATGCGGTTGGGATCGAAAGAGTAAAAGATCTTCTAAGTAGCGAAAATAAGTTTATGTCATTTCACAGCGTGATTCAAAAAGTAGGTAAGCGTTTTCCCTTTACCAAATTGCTCGGACTAATCCatgctatcccttacgtttggaAGCAAATATTAAGAGCCAAATGTACGGTAGACAATGAAACACAACACTGTAATAAGGTTGTGCTTCAGCCTGCGAAAAAAATATCATGTAAACACGCCCGTCGTATTCTTGTCGCTAGAAAATTTAAAGAACCTCTAGCAAACAATCGCCTGCGCAGATTGGGTGTTGAAGATATagaaaaaatcaatgaaattcatagtctttcttttagaatgacaaaagaaacgaagttaaatatttttcaattcaaCAGCAGCCGAGCAGTTTACAAACTGATGGCGGTTATTGTTCACATGGGAACAGTTGACGATGGACATTACATTACTTATCGCAGATTTGAAGCTGAGCATGCGTCGAAATGGCTTTACGCCTCGGATGAATTCGTGGAGAGCGTGTCACGTGATCAAGTCTTATCAAGCTGCGCTTACATGCTTTTCTATGAGAGAACTAGCAGGAACCATTATGGGCTCCCGAACTAG

Transcript

ENSXFYT00000058495

Protein

Uniprot

Gene family

Uniprot term	Description
P14381	Transposon TX1 uncharacterized 149 kDa protein OS=Xenopus laevis OX=8355 PE=4 SV=1
P11369	LINE-1 retrotransposable element ORF2 protein OS=Mus musculus OX=10090 GN=Pol PE=1 SV=2
P08548	LINE-1 reverse transcriptase homolog OS=Nycticebus coucang OX=9470 PE=4 SV=1

Gene family	Subfamily
Ubiquitin Family	DUB\|USP\|USP

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00443	UCH	Ubiquitin carboxyl-terminal hydrolase	Family	Interproscan
PF00078	RVT_1	Reverse transcriptase (RNA-dependent DNA polymerase)	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR038765	Homologous_superfamily	Papain-like cysteine peptidase superfamily	Interproscan
IPR043502	Homologous_superfamily	DNA/RNA polymerase superfamily	Interproscan
IPR001394	Domain	Peptidase C19, ubiquitin carboxyl-terminal hydrolase	Interproscan
IPR018200	Conserved_site	Ubiquitin specific protease, conserved site	Interproscan
IPR028889	Domain	Ubiquitin specific protease domain	Interproscan
IPR000477	Domain	Reverse transcriptase domain	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR31635	REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN-RELATED	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0004843	Molecular Function	cysteine-type deubiquitinase activity	Interproscan
GO:0016579	Biological Process	protein deubiquitination	Interproscan