Gene detail

Detailed information of ENSXLYP00000001395.1 in Pelagia noctiluca

Genomic Location: :...
NR annotation: CAH3194699.1, unnamed protein product, partial [Porites evermanni]

Gene Structure

More details in Jbrowse

Sequence

CDS

ENSXLYT00000001502

ATGGCGGCGGAGCAGAAGACTCGATTGCAACAAGGCTTTGCCACTTTACTTTCTTGCGTAATTATTGTTGCCATGCTTTGCTCGTCATGTTATATTGCCGTATTACAAGCAAAAGTTTGTCGCTCGATAAACAAGCTGGAATTACGAGTCGATAcgattgaaagaaaaatttttcaaaagagcATTCGGAAGACAAGCAACAACGATCAAGAGACCgaccatttttaccaaacatttttaCTAAAAACAGTGGccaatgaagtcatgaaagtagACTCAGGTCatttgaaagaaataaagttACGACTCAATGCATACGAGGCTGTAAACAGAAGGAACAGATTGGTCACATGGAAATTAAAAAGGCGAGTAGATTCATTAAAGACAAACCTGCACTTATCAGATAATACTTACAAAGTATTTGGCAACGAACAAGttttagtGAGAGCAAGGGATAAGCGATCAGTCAGACTAGGTGAAAAGGCAAGGGACATTCCATGGAAGCTTTACATGCCTGTTTCCCTGACAATAACCGGTAACAAAACCATGGGTACAGTGCTGACATTAAGAGGCCCACCCGGAGAAAAGGGCAAGCCTGGAGCAAGGGGTAAACGCGGAAAAGCTGGACCACGGGGACTAAAAGGCGATAACGGAGACATCGGGTTAAAGGGAGATGCTGGAATGATAGGTCGTACTGGAGAAAAGGGTCAAAAAGGCAACAAAGGACATCAAGGCTCGAAAGGAGAAAGAGGAGGCACGGTAGCAGTTCCTAAAATCATTGCAGCACCAGTTAATCAGACAGTTCTATCACCTGGTCAAGCAACTTTCACGTGTGAAGCAACCGGAAGTCCAAAACCACAAGTAACCTTGGTACCAAAAGGCAAGGTAAAGGACAGCAGATACGAAACCTTCGATGAAGGAACTCTCTCGATAAGAAATGTCATGTTAACAGATAAAGGTGCAATTGAATGTATAGCAAAGAATGCATTGGGAGAGGAGAGGAGGACCGCTTATCTTTTTGTGAATGCAAAAGCCAAAGCAACGATAAGAAATAAAGCGATCCGAACAGAAGCAGGGTTAAATGTTGTTATCGACTGTGTCGTTGAAGGCTTCCCAGAACCAGTTGTGACATGGAAAAGAGCTGGAAAGAATCTGCCATCGAGCACCAGatttagcaacaacaacaaaagaatAGAGCTAGTTAGAGTTTCTTCCGGTGACGGGGGTAATTACATATGCGAGGCTGTCAACGCTCATGCGACGTCGTCCGCCTTTTCTTTTGTTGCCGTGGTTGACAAACTCACTTTTCTTGCAAAACCAAATAAACGGATGCTCGTAAACACGTTTTTGAACTTCAACATCCCTTGTGCATACATTGGTGGTGTTCCTCCTGTTGAAGTAACATGGAAGAAAGATGGAAAAGAGTTGCAAGATAAGGCTGTCATTTCGAAAGACTTAAGAACCCTTGAGATAAAAAATGTCACAAAGGATGATTTGGGTACGTATTCTTGCCATGTAAAGTCACAAATGTCTTATATAACAATGAGCGTGGAGTTGTTGTCCTCAAACTTTTATCTTCCTACTTGCGGTGACTTGAAAAAAAACGGTATTGAGAAATCCGGTCATTTTCTCATCAACCCATCCCGAGATCCATCTGAGAGACCAGTCAATGTTTATTGTGAAATGGAGGGTCGGAATGGAGTTACTCTTGTGTCTCACGACAGTGAGGCTAACACAGAAGTGAATGGCTTAGAGCCTGCTGGTAGTTACAGCAAAAAAGTTATATATGCTGCTTCAGATATTCAAATAAAAGCACTTACACGCATTTCCAAAAGATGCAAGCAGTATATCAAGTATGAATGCACAGGAAGTGTCCTTTACCTACATCGAAAAAGTCCTATTGCATGGTGGGTATCATTCACAGGTCAAAGAATGCTTAACTGGGGTGGAGTTTCATACCCAAATAAAGGCTGTGCCTGTACACTTAACAAGTCATGCCCATCTGGAGGAACTTGTATGTGTGAT

Transcript

ENSXLYT00000001502

GATAAGTCTGAAAAGCAAAGATGGCGGCGGAGCAGAAGACTCGATTGCAACAAGGCTTTGCCACTTTACTTTCTTGCGTAATTATTGTTGCCATGCTTTGCTCGTCATGTTATATTGCCGTATTACAAGCAAAAGTTTGTCGCTCGATAAACAAGCTGGAATTACGAGTCGATAcgattgaaagaaaaatttttcaaaagagcATTCGGAAGACAAGCAACAACGATCAAGAGACCgaccatttttaccaaacatttttaCTAAAAACAGTGGccaatgaagtcatgaaagtagACTCAGGTCatttgaaagaaataaagttACGACTCAATGCATACGAGGCTGTAAACAGAAGGAACAGATTGGTCACATGGAAATTAAAAAGGCGAGTAGATTCATTAAAGACAAACCTGCACTTATCAGATAATACTTACAAAGTATTTGGCAACGAACAAGttttagtGAGAGCAAGGGATAAGCGATCAGTCAGACTAGGTGAAAAGGCAAGGGACATTCCATGGAAGCTTTACATGCCTGTTTCCCTGACAATAACCGGTAACAAAACCATGGGTACAGTGCTGACATTAAGAGGCCCACCCGGAGAAAAGGGCAAGCCTGGAGCAAGGGGTAAACGCGGAAAAGCTGGACCACGGGGACTAAAAGGCGATAACGGAGACATCGGGTTAAAGGGAGATGCTGGAATGATAGGTCGTACTGGAGAAAAGGGTCAAAAAGGCAACAAAGGACATCAAGGCTCGAAAGGAGAAAGAGGAGGCACGGTAGCAGTTCCTAAAATCATTGCAGCACCAGTTAATCAGACAGTTCTATCACCTGGTCAAGCAACTTTCACGTGTGAAGCAACCGGAAGTCCAAAACCACAAGTAACCTTGGTACCAAAAGGCAAGGTAAAGGACAGCAGATACGAAACCTTCGATGAAGGAACTCTCTCGATAAGAAATGTCATGTTAACAGATAAAGGTGCAATTGAATGTATAGCAAAGAATGCATTGGGAGAGGAGAGGAGGACCGCTTATCTTTTTGTGAATGCAAAAGCCAAAGCAACGATAAGAAATAAAGCGATCCGAACAGAAGCAGGGTTAAATGTTGTTATCGACTGTGTCGTTGAAGGCTTCCCAGAACCAGTTGTGACATGGAAAAGAGCTGGAAAGAATCTGCCATCGAGCACCAGatttagcaacaacaacaaaagaatAGAGCTAGTTAGAGTTTCTTCCGGTGACGGGGGTAATTACATATGCGAGGCTGTCAACGCTCATGCGACGTCGTCCGCCTTTTCTTTTGTTGCCGTGGTTGACAAACTCACTTTTCTTGCAAAACCAAATAAACGGATGCTCGTAAACACGTTTTTGAACTTCAACATCCCTTGTGCATACATTGGTGGTGTTCCTCCTGTTGAAGTAACATGGAAGAAAGATGGAAAAGAGTTGCAAGATAAGGCTGTCATTTCGAAAGACTTAAGAACCCTTGAGATAAAAAATGTCACAAAGGATGATTTGGGTACGTATTCTTGCCATGTAAAGTCACAAATGTCTTATATAACAATGAGCGTGGAGTTGTTGTCCTCAAACTTTTATCTTCCTACTTGCGGTGACTTGAAAAAAAACGGTATTGAGAAATCCGGTCATTTTCTCATCAACCCATCCCGAGATCCATCTGAGAGACCAGTCAATGTTTATTGTGAAATGGAGGGTCGGAATGGAGTTACTCTTGTGTCTCACGACAGTGAGGCTAACACAGAAGTGAATGGCTTAGAGCCTGCTGGTAGTTACAGCAAAAAAGTTATATATGCTGCTTCAGATATTCAAATAAAAGCACTTACACGCATTTCCAAAAGATGCAAGCAGTATATCAAGTATGAATGCACAGGAAGTGTCCTTTACCTACATCGAAAAAGTCCTATTGCATGGTGGGTATCATTCACAGGTCAAAGAATGCTTAACTGGGGTGGAGTTTCATACCCAAATAAAGGCTGTGCCTGTACACTTAACAAGTCATGCCCATCTGGAGGAACTTGTATGTGTGATAT

Protein

Uniprot

Uniprot term	Description
V6CLP5	Kettin homolog OS=Caenorhabditis elegans OX=6239 GN=ketn-1 PE=1 SV=1
Q2EY13	Protogenin B (Fragment) OS=Danio rerio OX=7955 GN=prtgb PE=2 SV=1
Q6PDN3	Myosin light chain kinase, smooth muscle OS=Mus musculus OX=10090 GN=Mylk PE=1 SV=3

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF07679	I-set	Immunoglobulin I-set domain	Domain	Interproscan
PF13927	Ig_3	Immunoglobulin domain	Domain	Interproscan
PF01391	Collagen	Collagen triple helix repeat (20 copies)	Repeat	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR036179	Homologous_superfamily	Immunoglobulin-like domain superfamily	Interproscan
IPR050958	Family	Cell Adhesion and Cytoskeletal Organization	Interproscan
IPR003598	Domain	Immunoglobulin subtype 2	Interproscan
IPR007110	Domain	Immunoglobulin-like domain	Interproscan
IPR036056	Homologous_superfamily	Fibrinogen-like, C-terminal	Interproscan
IPR013783	Homologous_superfamily	Immunoglobulin-like fold	Interproscan
IPR013098	Domain	Immunoglobulin I-set	Interproscan
IPR003599	Domain	Immunoglobulin subtype	Interproscan
IPR008160	Repeat	Collagen triple helix repeat	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR45080	CONTACTIN 5	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0005886	Cellular Component	plasma membrane	Interproscan
GO:0007156	Biological Process	homophilic cell adhesion via plasma membrane adhesion molecules	Interproscan