Gene detail

Detailed information of ENSXLYP00000004569.1 in Pelagia noctiluca

Genomic Location: :...
NR annotation: XP_002160090.1, cytoplasmic protein NCK2 [Hydra vulgaris]

Gene Structure

More details in Jbrowse

Sequence

CDS

Transcript

ENSXLYT00000004745

CTTAAAACTGAAGACAATGGGGGAAGACACAAACGTAGCCGTGGCTATTTACGATTACAAAGCACAAGATAAAACAGAACTCAGCATACAAAAAAACGAGAAGTTGGTTGTGCTGGACGACACTCAGCCTTGGTGGAGAGTCAAGAATGAGCGCAGTGTATCGGGGTATGTGCCATCGAACTACCTTGAAAGGAAGGGGAGTAAGAAGGGGATAATGGGCCAGCTAAAGAACAAAATGGGCGGAAAGATCAGTAAAGATAAATCATCAAACAACGAAGCTCAAAACGTGAATAAGGTTCTTGGCAAAAGCAGTAATAAGATCCTTGCTATTTGCATCGCCAAGTACAACTACGCTTCTCAACGCGATGATGAACTTAATATTAACAAAGGAGATCAGATTTTGGTTATTGAGCAAGAGAATGACGGCTGGTGGAAGGGGGAGAGAAATGGCAAAAGTGGGTGGTTTCCCAATAATTATGTTGATATTGTCGACCCTAAAGAGGCACCCCAGTCTGAATATGCGCTACCCTCTGATGTAATGCCTGGTTCTAATGGAAGCTCGTCCGATCCAGTTATTTGTAAGGTTCAGACACTCTACCCGTTTCACTCGCAGTCTAGAGAAGAGCTCACTTTTGAAAAAGACGTTGTTTTAGAGATCATTGAGAAACCCAAGGACGACCCTGATTGGTGGAAGGCGCGTACGTCACAAGGGGAAGTAGGTCTAGTTCCGAGAAATTACTTACAGGAGGTAGAAATTGATATTCCTGAGCCGGTCGCAGTTCCGGTCCCACCGAACCCGGTGAAGAATGAAGTTGCGTCACATGTGTTTGCGAATGAAGATTGGTTTCATGGAAGACTGATGAGGGTGGAGTGTGAAAAGTTACTGCATAATTATGGGAATGATGGAGAGTTTCTTCTAAGAGAAAGCGAGAGCAAGGCCGGTGATTTCTCGTTATCAATGAAAGCTCCTAACCGCATCAAACACTTCAGGATAAAATCGGAAGACAACCAGTTCGTAATAGGCCAGCGTTCCTTCGACACCATGTACGACCTGATCACTCACTACAAGACCTCGCCTATCTTCACCACGGAAAACGGCGACCGCATGTTTCTAGGTAAACCATTCAACAGGGCCATCAGCAAAATTCGACAGTAACTCAATTGGACTTAACTTCATataataatgaataatttttAGAGATATGTTAATTCGTGCATAGTTGGAAGCTTCATGTAACGGGCACCGATGAGGGGAATGCATAGGTTGGTCCTAGTTTCCGTACTCTAAGAGTTACCATCTCTAATAGTTTGAATATTATTGCACATCGTTCCTCGATTGATGTTGGTCGTCCTCGAAATCCTCATCCCGTTGCAATATTATTTTGAATTCGTCACTAAATCGTTCCCAATTGTTTCGTATTGGCTGCTAGTCGTTTCTAATCATTTGCATATCGTTGCATGTCGTTTATCAATTGATGCAAGTCGTCCATAAAATTCTCAAACAGTtgcagaatattttcaaaatcttttcaaaattgtGTCTTAATCTGTGAGATTCGTTTCGTAATTCGCTGCAAATCGTTCCTCATCATTCGCATATCGTTGCTTATCGTTCCTCGATTGTTGCGAATCATCGAGAAACTTCTCAAGTAATTGCAATATAACTTTTAAACCGTCACTGAAGCGTTTCAGAATCGTTCGAATTCGTAACAATAACTTGTGCACATTCCCTTCCAAACAGTTGTTCGTTGATTGAAGACCCAATGTGCAGTCATTTCAATTGACCAATATAAAGTGTCTTTGTTGTAGGCGAATGGGGTAAGGTTCGTGATGGGATGTTACAACTGTTATCACAACAGCTATTGATGCCTGATCTCTCATGTATTCGCTCCTGAGGACTGCTAAGGAGGGAAAGTAGGTTGATACCACCTCGATGAACCGGGTTGAAATATTTTCGATTGCTcccttgaaatttgaatttaacttTAAACAATGAGCTATTTTGGATTTAATTCTTCAAATGCAAACCGGACTCTTTTTATCAGTTATTTTCCACTTGCGTAAAATCGTATTATTAACAGCTGTTAATTCTCAAATTTATGAATTTTGTAATTATAACGG

Protein

Uniprot

Gene family

Uniprot term	Description
P16333	SH2/SH3 adapter protein NCK1 OS=Homo sapiens OX=9606 GN=NCK1 PE=1 SV=1
Q99M51	SH2/SH3 adapter protein Nck1 OS=Mus musculus OX=10090 GN=Nck1 PE=1 SV=1
O43639	Cytoplasmic protein NCK2 OS=Homo sapiens OX=9606 GN=NCK2 PE=1 SV=2

Gene family	Subfamily
Ubiquitin Family	UBD\|Other\|SH3

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00018	SH3_1	SH3 domain	Domain	Interproscan
PF00017	SH2	SH2 domain	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR001452	Domain	SH3 domain	Interproscan
IPR036028	Homologous_superfamily	SH3-like domain superfamily	Interproscan
IPR036860	Homologous_superfamily	SH2 domain superfamily	Interproscan
IPR000980	Domain	SH2 domain	Interproscan
IPR051184	Family	Tyrosine-phosphorylated adapter molecule	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR19969	SH2-SH3 ADAPTOR PROTEIN-RELATED	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0005515	Molecular Function	protein binding	Interproscan
GO:0007165	Biological Process	signal transduction	Interproscan
GO:0016477	Biological Process	cell migration	Interproscan
GO:0030971	Molecular Function	receptor tyrosine kinase binding	Interproscan
GO:0035591	Molecular Function	signaling adaptor activity	Interproscan
GO:0036493	Biological Process	positive regulation of translation in response to endoplasmic reticulum stress	Interproscan
GO:1902237	Biological Process	positive regulation of endoplasmic reticulum stress-induced intrinsic apoptotic signaling pathway	Interproscan
GO:1903898	Biological Process	negative regulation of PERK-mediated unfolded protein response	Interproscan
GO:1903912	Biological Process	negative regulation of endoplasmic reticulum stress-induced eIF2 alpha phosphorylation	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
K19862	NCK2, GRB4; NCK adaptor protein 2	-	Pathogenic Escherichia coli infection	ko05130	deepkoala