Detailed information of ENSXLYP00000009511.1 in Pelagia noctiluca

Genomic Location: :...
NR annotation: RMX58234.1, hypothetical protein pdam_00000057 [Pocillopora damicornis]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
Q99PF4Cadherin-23 OS=Mus musculus OX=10090 GN=Cdh23 PE=1 SV=2
P58365Cadherin-23 OS=Rattus norvegicus OX=10116 GN=Cdh23 PE=2 SV=1
P33450Cadherin-related tumor suppressor OS=Drosophila melanogaster OX=7227 GN=ft PE=1 SV=3

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00028CadherinCadherin domainDomainInterproscan
PF12661hEGFHuman growth factor-like EGFDomainInterproscan
PF19028TSP1_spondinSpondin-like TSP1 domainDomainInterproscan
PF00008EGFEGF-like domainDomainInterproscan
PF00090TSP_1Thrombospondin type 1 domainDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR015919Homologous_superfamilyCadherin-like superfamilyInterproscan
IPR000742DomainEGF-like domainInterproscan
IPR002126DomainCadherin-likeInterproscan
IPR036383Homologous_superfamilyThrombospondin type-1 (TSP1) repeat superfamilyInterproscan
IPR000884RepeatThrombospondin type-1 (TSP1) repeatInterproscan
IPR000436DomainSushi/SCR/CCP domainInterproscan
IPR001881DomainEGF-like calcium-binding domainInterproscan
IPR013032Conserved_siteEGF-like, conserved siteInterproscan
IPR050174FamilyProtocadherin/Cadherin-related Cell AdhesionInterproscan
IPR044004DomainSpondin-like TSP1 domainInterproscan
IPR000152PTMEGF-type aspartate/asparagine hydroxylation siteInterproscan
IPR018097Conserved_siteEGF-like calcium-binding, conserved siteInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR24028CADHERIN-87AInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0005509Molecular Functioncalcium ion bindingInterproscan
GO:0016020Cellular ComponentmembraneInterproscan
GO:0007156Biological Processhomophilic cell adhesion via plasma membrane adhesion moleculesInterproscan
GO:0005887Cellular Componentplasma membraneInterproscan
GO:0007155Biological Processcell adhesionInterproscan

TOP