Gene detail

Detailed information of ENSXLYP00000012840.1 in Pelagia noctiluca

Genomic Location: :...
NR annotation: XP_047124425.1, heterogeneous nuclear ribonucleoprotein H [Hydra vulgaris]

Gene Structure

More details in Jbrowse

Sequence

CDS

Transcript

ENSXLYT00000013444

GGCGCTGGCACACAATGATGAGCATATGGGAAAGCGTTACATTGAAGTGTTTGAATCGAAACATTCTGAAATGGAGTGGGTTGTGAATCGTATGACTGGTGAAGGAGCAGTAGGGTCTGAGACAGATGCTGTGGTCAGGTTGCGTGGTTTGCCATATGGCTGCTCAAAACAGGACATCGCAGAATTCTTTAGCGATATATCGAAATATTCAAGAGCTCGAAAAGCGAGATAAAGTATGTCATCGGGCCCAAACCGAAACCCTTGATGTCGATTCGCCCGAGCCCGTACGACAGACCGGCTCAGTTCTCTGGAAGGGCCCGTGGTCGAGGGGGGCTCGGCGCAAGCGGGTTCAACGACTTCGGATATGATGATACCCCAGCCCCTAGTGGCTATGGAGCAGCAGGCAGCCGTGGTCGTGGACCAAGAGGACGTGCTGCTGGCCGTGGTGGAGGAAGAACCGGGGGATCTGGCGCATCCAGTCAACTGACGGTCATGAACAGCACCACTGGACACAGCTTGCATATGAGGGGGCTGCCGTTTGATTCCACGGAGGATGACGTGCACCAGTTCTTTGCCCCCCATGCCCCAGTCAGTGTAAGGATTATCTACGAGCCTAACGGAAGACCGAAGGGAGAGGCTGATGTTGATTTCGCCACTCATGAAGCTGCCACTGCTGCCATGGCCAAACACAAGCAGAATATGGGACGTCGTTACATCGAGTTATTCTTGCAGTCAACCCCTGCTGGTAATGGATGGAGCACTGGTATGCGCAACAACAACACTGGCTATGGTACCTCTAAAAaTGGAAATACCTTTGGAAGTGGGGGCTATGATTATGACCAAGGTGGCAACACTGGCTATAGCTCCGGATACAGTGGCTACAGTGGATATGGGGCATCCCGGGTCAGGGGAACCAGCATGCCAGGCGTGAGTACCTCGCAGATGGATGAGGTTTACCGTGACAACACCAACTTTGCGGCTGATGTTACCTACCCCGGTGCTGGCAACTTCTTCGGGCAGCAGTCTGGCTACAACTGATGGACGTCAGTTTGTGTGTGGCACTGGTATGGGCTGAATGGAGACTATGAATATTAGGTTTGTTTGCATTTACTAGCCAATGTGTGCATTTATTTCTTGTTCTTGTTCATGCAAGCAAGCAAGCTACTTAAGGGGGTTATGCTGCTTAAGGGGCTGTGCTGCTTAAGGGGTTTATGCTTGCTTGAAATATACGGCTTTTAAGGGACTGCCTACGAATTGATGTTGCGAATTGGAACAAATGGCAACAATTTTGCAAAGATCTCAGGACAATAGATGATTCCGTGCAAGATAGGTGCTCTCATTTTACGCAATGTCTAACAGAAATACAACCCTTTACAATGCATAGCTAACAACATTGCTACCGAAATGGCCCAGATATGTCCCATCTGCAGCCAATCTGCAgttgttagttttggtagctattcattgctaaggagcatattcCTTTTATGCATTGCGTGAAGTAAGGCATGCCACCTTTTACGGAATCCATCTTTTTTAATGGTAGGCCTGTACTGCGGCCAAGTCAATATCCACATTCTTGTACAGGGCTTTCTGAATGATATATTCATATGTTAACTAACGACAACTAACGACTGTAACTCTTCCGGTTTGGCGAATTTGCAATGTATATTTGTGGGCAATTCCAAATAAGCTTGTTTTAAAAAATACAGCGATAGGTATCTTATGTGACAATACTTTTATTTAAAACGGGGGCATGTATCATGTTAGAAGAAGTATTTTTGTGCAGGTACAAGTTGATATCAATCTACAGTAAATtgcactttttataagaatagatGGTTATTGTGGCCCgaaatttccaaaaaatgaaattaaacgTTTAAATTGGGAAAGATTAGATCGCCATCAACAATTTCAATCTCCAAGTGCTATTAAGGTAACCTGACATttatttcttatgaaattgaaCCATAGTTCCACGATAGACCTTTtccccaattacgtcatctctatagaaattcatctcgaaacaac

Protein

Uniprot

Uniprot term	Description
Q3SZF3	Heterogeneous nuclear ribonucleoprotein H2 OS=Bos taurus OX=9913 GN=HNRNPH2 PE=2 SV=1
P55795	Heterogeneous nuclear ribonucleoprotein H2 OS=Homo sapiens OX=9606 GN=HNRNPH2 PE=1 SV=1
P70333	Heterogeneous nuclear ribonucleoprotein H2 OS=Mus musculus OX=10090 GN=Hnrnph2 PE=1 SV=1

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00076	RRM_1	RNA recognition motif	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR012677	Homologous_superfamily	Nucleotide-binding alpha-beta plait domain superfamily	Interproscan
IPR000504	Domain	RNA recognition motif domain	Interproscan
IPR035979	Homologous_superfamily	RNA-binding domain superfamily	Interproscan
IPR050666	Family	Epithelial Splicing Regulatory	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR13976	HETEROGENEOUS NUCLEAR RIBONUCLEOPROTEIN-RELATED	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0003723	Molecular Function	RNA binding	Interproscan
GO:0003676	Molecular Function	nucleic acid binding	Interproscan
GO:1990904	Cellular Component	ribonucleoprotein complex	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
K12898	HNRNPF_H; heterogeneous nuclear ribonucleoprotein F/H	-	Spliceosome	ko03041	deepkoala