Gene detail

Detailed information of ENSXLYP00000017464.1 in Pelagia noctiluca

Genomic Location: :...
NR annotation: CAH3120490.1, unnamed protein product [Porites lobata]

Gene Structure

More details in Jbrowse

Sequence

CDS

Transcript

ENSXLYT00000018208

GGCTGGTTTGACGCCATTTCATCAGCATAGAAACATCACAAGTATAACCGGAGGTGTTTCTTATCAATACAGCATTTTTCGATTCTCTTTGCTTCCTTGTTTCTCAAAGtggaaggaaatttctttgGTACAAAAATTGAAGATTGAGCTTCGAAATGAATCTTAACCTAAATGAGTTACCTCGTTTTGACGACGAGACGCGATTACGCGTGCGTGATTCTTGAAAAATTCAACTCTTGGAGAAGGCCTAAAGCTAACTTTCGGAGGTCCTTCTGCTTCTGCCTCAACAAGAAGTAAATATGATCAGGACTTTGGCACAACACTTGTTTAACAACGGAGGTGGAAACAAGCAAGTTTATGGACTTTATACCAAAGCTAATTTATTAAAGGAAAATCCTAAAGGCCTCATCAAGCTTTGGAATGAATTACAAATAAGATGTTATGCCGCAGAAGCTTCAAAGAAAACTTTCGACAGAACAAAGCCCCATGTTAATATTGGCACAATTGGACACGTTGATCACGGAAAAACTACGCTTACCGCTGCAATCACTAAAGttCTCGCTGACACTGGCACAGCTCGCTACAAGCATTACGCTGACATAGATAACGCTCCTGAAGAGAAAGCAAGAGGTATCACAATCAATGCATCACACGTAGAATACGAGACTGAAAATCGACATTATGGACATATTGACTGTCCCGGTCATGCTGATTATATCAAGAACATGATAACTGGTGCAGCCCAGATGGATGGTGGTATTCTTGTCGTTGCGGCCACTGATGGTCAAATGCCCCAAACAAGGGAACATCTTCTTCTTGCCAATCAGGTGGGAGTGAAACATTTGGTTGTTTACATAAACAAGGCTGATGCAGTGGACGACCCTGAGATTTTAGATCTGGTCGAGTTGGAAATGAGAGAAATTCTCACAGAGTACGGATATGATGGAGATAACACTCCTGTCGTGATAGGGTCAGCACTGAGCGCCTTGGAAGAGAAGAACAAGGAGCTTGGATACGACACCATCGTCCAGTTATTAGAAGCTGTTGACTCTTTTATTCCCACTCCCACTCGGGATCTTGATAAACCCTTTCTGCTTCCCATTGAAGATGTGTTCTCCATAGCTGGCAGGGGTACTGTCGTGTCTGGTCGTGTTGAGCGAGGGGTGATCAACAAAGGGGAAGATGTTGAAATCATTGGACAAGGTCTCTCATTAAAAACTACTGTAACAGGTTTGGAAATGTTCCACAAACAACTGGATCGTGGTCAGGCAGGTGATAATCTGGGAGCGTTGATCAGAGGGATCAAGAGAGAAGATGTGAAGCGAGGCATGGTCATGTGTGCTCCTGGCTCCATCAAACCTTTCTCTAAAATTGAAGCCCAGgtttacattttgaagaaagaagaaggtGGGCGCCACAAGCCATTCGTGACGAATTACACTCCTCAAATATACGTGCGAACTGCCGATGTCGCTGCAGCAATAACACTGCCCGAAGGCACGTCATTTGTGATGCCAGGAGACGATGCCAAATTCACCATGTCCCTCATGCACCCACTGCCCATGGAAATTGGACTTAGGTTCACCTTAAGAGAAGGTAGTAGAACTGTCGGTACTGGAGTCGTCACGAAATTGATCGAGTGAATTGCAAGCTAGCCCAGTAAGCCTGTATACTGTATGTGATATAGCGGCCTCGCTATTATGTAACTATTTTCATTGAGTTTATTGTCGAAAAGTCGTGCTTTAAGCTTCAAACTTGCAGAATTTATTAATTTCAAATCAAGTTTTGCCTCTGGTTTCACTTTGCCTCTTTATGAATACCCATAGTGGTTTTATCTGTTCCGGATAAAGCAAGAGTAAATATGGTTCTGCAAGTtaacagttgataggcaattacACTCACTGTCTCTAACTGCCTTCTATCTAAGACTGATCGAATCAGTACATTGATAATCCATGATTAAGTGGCAAAAATGCTTGAAACATTTATAAGGTAGATTGGTTATGCACCAGATACGGAGGGACTAATTTCTAGCGCAAGACTAATCGAAGGAGTACATTTATAGGTGATAATTTAGATGCAAATACCTTTACTAtctcgtaaggtattggtgtatGCACAAAGCTCTAAAAACTAAACGAAATACCTAAAGTTCTCATCCTAACTTGAAATGTGTAGAAGAATTTATCACAAACAATCTCTCATTATTTTcactttatttcatttatgttTATCCATCAATTACGAAATGAGTGACTCGGCTTTGATAAGCCTTCTTTACTCTTTACTTATCTCTAAAGGTAATAACTGAGATTACAATAAAAGAACCTTCACTCTTTCCCATGGGCTATCGAGCATATTGGGAAGAGGGCTAATAGCAGAAATACTTGACCACGCACATTGATACCACGCCCTTCTATATCTTCTGGCTATTACTGTACCTCCTCCATTTTCTATAGCTCCAAGGTCCCTGCTCTTACCTAGAATTTATCACTTATAGGTATTTAGGATtcgcaaattttcaaaaagaatCTTCACAATTATTTGAAACCTCTCTCTTAAACTAAAACAAAAACTCCTATATTTACTACGACTTTGCTCCTGTAATTAAATTACACACTCGATACTAAAAGTTAAACTTG

Protein

Uniprot

Uniprot term	Description
A7HWP7	Elongation factor Tu OS=Parvibaculum lavamentivorans (strain DS-1 / DSM 13023 / NCIMB 13966) OX=402881 GN=tuf1 PE=3 SV=1
Q07KJ2	Elongation factor Tu OS=Rhodopseudomonas palustris (strain BisA53) OX=316055 GN=tuf1 PE=3 SV=1
Q0BUQ2	Elongation factor Tu OS=Granulibacter bethesdensis (strain ATCC BAA-1260 / CGDNIH1) OX=391165 GN=tuf PE=3 SV=1

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00009	GTP_EFTU	Elongation factor Tu GTP binding domain	Domain	Interproscan
PF03144	GTP_EFTU_D2	Elongation factor Tu domain 2	Domain	Interproscan
PF03143	GTP_EFTU_D3	Elongation factor Tu C-terminal domain	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR000795	Domain	Translational (tr)-type GTP-binding domain	Interproscan
IPR009000	Homologous_superfamily	Translation protein, beta-barrel domain superfamily	Interproscan
IPR033720	Domain	Elongation factor Tu, domain 2	Interproscan
IPR027417	Homologous_superfamily	P-loop containing nucleoside triphosphate hydrolase	Interproscan
IPR004541	Family	Translation elongation factor EFTu/EF1A, bacterial/organelle	Interproscan
IPR004161	Domain	Translation elongation factor EFTu-like, domain 2	Interproscan
IPR050055	Family	Elongation factor Tu GTPase	Interproscan
IPR041709	Domain	Elongation factor Tu (EF-Tu), GTP-binding domain	Interproscan
IPR004160	Domain	Translation elongation factor EFTu/EF1A, C-terminal	Interproscan
IPR009001	Homologous_superfamily	Translation elongation factor EF1A/initiation factor IF2gamma, C-terminal	Interproscan
IPR031157	Conserved_site	Tr-type G domain, conserved site	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR43721	ELONGATION FACTOR TU-RELATED	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0003924	Molecular Function	GTPase activity	Interproscan
GO:0005525	Molecular Function	GTP binding	Interproscan
GO:0003746	Molecular Function	translation elongation factor activity	Interproscan
GO:0006414	Biological Process	translational elongation	Interproscan
GO:0005739	Cellular Component	mitochondrion	Interproscan
GO:0070125	Biological Process	mitochondrial translational elongation	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
K02358	tuf, TUFM; elongation factor Tu	-	Exosome	ko04147	deepkoala