Detailed information of ENSXLYP00000025287.1 in Pelagia noctiluca

Genomic Location: :...
NR annotation: AGT42223.1, retinoid X receptor [Aurelia aurita]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot Gene family
Uniprot termDescription
Q5I7G2Retinoic acid receptor RXR OS=Lymnaea stagnalis OX=6523 GN=RXR PE=1 SV=1
Q8T5C6Retinoic acid receptor RXR OS=Biomphalaria glabrata OX=6526 GN=RXR PE=1 SV=1
Q90416Retinoic acid receptor RXR-gamma-A OS=Danio rerio OX=7955 GN=rxrga PE=2 SV=2
Gene familySubfamily
Transcription Factors FamilyESR-like
Transcription Factors FamilyMiscellaneous
Transcription Factors FamilyNGFIB-like
Transcription Factors FamilyRXR-like
Transcription Factors FamilySF-like
Transcription Factors FamilyTHR-like
Transcription Factors FamilyGCNF-like

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00105zf-C4Zinc finger, C4 type (two domains)DomainInterproscan
PF00104Hormone_recepLigand-binding domain of nuclear hormone receptorDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR001628DomainZinc finger, nuclear hormone receptor-typeInterproscan
IPR035500Homologous_superfamilyNuclear hormone receptor-like domain superfamilyInterproscan
IPR016355FamilyNuclear hormone receptor family 5-likeInterproscan
IPR013088Homologous_superfamilyZinc finger, NHR/GATA-typeInterproscan
IPR000536DomainNuclear hormone receptor, ligand-binding domainInterproscan
IPR000003FamilyRetinoid X receptor/HNF4Interproscan
IPR001723FamilyNuclear hormone receptorInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR24086NUCLEAR RECEPTOR SUBFAMILY 5 GROUP AInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0003700Molecular FunctionDNA-binding transcription factor activityInterproscan
GO:0006355Biological Processregulation of DNA-templated transcriptionInterproscan
GO:0008270Molecular Functionzinc ion bindingInterproscan
GO:0043565Molecular Functionsequence-specific DNA bindingInterproscan
GO:0000978Molecular FunctionRNA polymerase II cis-regulatory region sequence-specific DNA bindingInterproscan
GO:0003677Molecular FunctionDNA bindingInterproscan
GO:0004879Molecular Functionnuclear receptor activityInterproscan
GO:0006357Biological Processregulation of transcription by RNA polymerase IIInterproscan
GO:0009755Biological Processhormone-mediated signaling pathwayInterproscan
GO:0009888Biological Processtissue developmentInterproscan
GO:0090575Cellular ComponentRNA polymerase II transcription regulator complexInterproscan
GO:0003707Molecular Functionnuclear steroid receptor activityInterproscan
GO:0005634Cellular ComponentnucleusInterproscan

 KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
K08524RXRA, NR2B1; retinoid X receptor alpha-Nuclear receptorsko03310deepkoala

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