Gene detail

Detailed information of ENSXQXP00000001826.1 in Sanderia malayensis

Genomic Location: not available for this species
NR annotation: no NCBI-NR hit recorded
Species Sanderia malayensis · all data for this species · gene families

Sequence

CDS

ENSXQXT00000002270

ATGGATAGTATTGTGTTTGCTTGGAAGAAGTTTTCCTCCGGGTTTACTGCACAATGTGAAGCACCATTATTTGATTATGCTGTGAAGCGAGCCAAACCTGATGATTTGAAAGTTGTGTTTTACAAGTATGCAAGTGTGGAACATGATGGTGATAGGTACATGACACCTCATGACTTCCTCAGAGACTTCCTTCAAATGGATGCAGCATGCTTCAATGATGCTACTTTGAAGCTCCTCTCTGGCTGTGTTGATGAAACCAAAGATGGGTTAATCTCGCTCCTCGAATTCCAAGCATTCGAAGCTCTTCTTTGCAGACCAGATGCAAAATTCAGGCtcttgtttcagttgtttgACTTGGATGGCAAAGGAAGCATCACATTTGATGAATTCAAGCACGTTATTGAATGCTGTACCACATACAAGAAGTTTCCATTTGCTTTTGATTCAAGTTTTACAAAGACATTCTTTGGAGAGAAGAGAGACCTTTCAATATCATATGCGGATTTCACACACTTTGTTAGAgaatttgaaaaggcATACATATTGCAAGCATTTGCCCAGAAGAGCAAGAAAGAAGGCCAAAAGGGTTACATGGAAGGCAAAGAGTTGTCAATTAGCTCACTGCATTTTGCAGAAATTATGAACACCCTGTTGGCACACAAGCTTTCACCTTATGCAGCTGAAAACATTGCAGCTCTTGCTTCCGATGGTGGCTCTAGAAGGGTGACATTGATGTTCTGCTTGGCTTTCAATGATATGCTGGACAATCTACCATCAATTCAACAAATGTTCAAATACATCACTCAGGATGGTAAATTCAAGAATATAACCAAAGAGGAACTCCTCAGACAAGCAGCCAGGAACAGACAGGTCACTCCACTTCAAGTTGAaattctttttcaaatttgcGGCCTTGGTAACCCAGGCACAGGGAAAATTTCCCTGGCCGATGTAAACGATCTGATACCCAAGAAAGATCCAATGACAATATTCTCAAAAATCCACGAAATTAAGAAATATATGGAAACTGAAAAAGAGCCAGAACCGCGAAAGCAAACGATAGGCATGCAGGGACTTGAGTCTTTGTATCGATTCGGAGTTGGTTCTATAGCTGGAGCTTGCGGAGCAACTGCTGTTTACCCAATCGATCTTGTGAAAACGAGAATGCAGAATCAGAGAAGCGTACTAGCTACAGAAATTCTCTACAAGAACAGCTTTGATTGCTTTTTCAAGGTGATCAGAAATGAAGGAGTCCTTGGCTTATATCGAGGTTTGCTTCCACAACTTGTTGGTGTTTCGCCAGAGAAAGCTATCAAGTTAACGACGAATGATTTCGTCCGTGGCAAGATGAAGGATAAAGATGGTGAAATTCCTTTGTATGGCGAGATAATGGCAGGAGGATGCGGAGGCGGAGCACAGGTGCTGTTTACCAATCCGATTGAAATTGTGAAAATCAGGATGCAAGTGGCTGGGGAGATTGGTGGACAGAAATCCTCGGCCGTGACCCTCTGTAAAGAATTGGGCTTGTTTGGATTGTACAAGgGTGCAAGAGCATGTTTCCTACGTGATATACCATTCTCAGCGATTTATTTCCCATGCTACGCTCATCTCAAGGAGTACTTGGCTGATGAGAATGGCTGGAACAACTGGCATACCTTGCTTATTGCTGCGGCTGGAGCAGGTGTACCAGCAGCATACTTAGTCACACCGgcggatgtcatcaaaacacGTTTGCAAGTGAAGGCAAGGCGTGGCCAGCAAGCATATCGTGGCGTAGTCGACTGTTTTAGGAAAATCTTGGCAGAAGAAGGTGCTAAGGCATTTTGGAAGGGCGGTCCTGctcGTATATTCCGCTCATCGCCACAGTTTGGTGTGACGTTGCTTGTTTATGAAATGATCCAAAGGTTTTTCTATGTTGATTTTGGAAGCGGCTTGCCAAAGTCTGAGCTGGCTCCAGTCAATCCGGAGGTTTCCAAGCATCCGGACCACATCGGAGGTCTCCGGTTGGCGGTGTCGACATTCTCCGGTATCGAGACGAAATTTGGACTGTTTTTACCAAAGTTCCACGCTTCTCCGGTAAGACCAATTAAACCAGAAGCTGTGACAATGCCCGTTGCTCCGATAATGCCAGTTGAAACCAAAACAATCTGA

Transcript

ENSXQXT00000002270

ACGTTTAGCACAGCAAATCACGTGAGCAGTTTGTTTTGATTGGCTGACACTACCCGAAGGCATGCATAATTTGCAGTTTGTGTTCCTGTCtgcttgcattgcattgcagtgCAGCGTTGCTTTTTGGCGTTGAGTTCAAAACAGTGGCTAGAAGACGACAACAATAACATCCTTTTTCAAGGCCTTACTATCTGACAACTCGTGACCAGCCTTTGTGCCTGCAGACCGCAATGAAAGCAGAGTGTCCGTGTAAAATCGAAAGTTATTCTGTCAAGCTCCTGTAAAAACAAAGGTTTATCATGGATAGTATTGTGTTTGCTTGGAAGAAGTTTTCCTCCGGGTTTACTGCACAATGTGAAGCACCATTATTTGATTATGCTGTGAAGCGAGCCAAACCTGATGATTTGAAAGTTGTGTTTTACAAGTATGCAAGTGTGGAACATGATGGTGATAGGTACATGACACCTCATGACTTCCTCAGAGACTTCCTTCAAATGGATGCAGCATGCTTCAATGATGCTACTTTGAAGCTCCTCTCTGGCTGTGTTGATGAAACCAAAGATGGGTTAATCTCGCTCCTCGAATTCCAAGCATTCGAAGCTCTTCTTTGCAGACCAGATGCAAAATTCAGGCtcttgtttcagttgtttgACTTGGATGGCAAAGGAAGCATCACATTTGATGAATTCAAGCACGTTATTGAATGCTGTACCACATACAAGAAGTTTCCATTTGCTTTTGATTCAAGTTTTACAAAGACATTCTTTGGAGAGAAGAGAGACCTTTCAATATCATATGCGGATTTCACACACTTTGTTAGAgaatttgaaaaggcATACATATTGCAAGCATTTGCCCAGAAGAGCAAGAAAGAAGGCCAAAAGGGTTACATGGAAGGCAAAGAGTTGTCAATTAGCTCACTGCATTTTGCAGAAATTATGAACACCCTGTTGGCACACAAGCTTTCACCTTATGCAGCTGAAAACATTGCAGCTCTTGCTTCCGATGGTGGCTCTAGAAGGGTGACATTGATGTTCTGCTTGGCTTTCAATGATATGCTGGACAATCTACCATCAATTCAACAAATGTTCAAATACATCACTCAGGATGGTAAATTCAAGAATATAACCAAAGAGGAACTCCTCAGACAAGCAGCCAGGAACAGACAGGTCACTCCACTTCAAGTTGAaattctttttcaaatttgcGGCCTTGGTAACCCAGGCACAGGGAAAATTTCCCTGGCCGATGTAAACGATCTGATACCCAAGAAAGATCCAATGACAATATTCTCAAAAATCCACGAAATTAAGAAATATATGGAAACTGAAAAAGAGCCAGAACCGCGAAAGCAAACGATAGGCATGCAGGGACTTGAGTCTTTGTATCGATTCGGAGTTGGTTCTATAGCTGGAGCTTGCGGAGCAACTGCTGTTTACCCAATCGATCTTGTGAAAACGAGAATGCAGAATCAGAGAAGCGTACTAGCTACAGAAATTCTCTACAAGAACAGCTTTGATTGCTTTTTCAAGGTGATCAGAAATGAAGGAGTCCTTGGCTTATATCGAGGTTTGCTTCCACAACTTGTTGGTGTTTCGCCAGAGAAAGCTATCAAGTTAACGACGAATGATTTCGTCCGTGGCAAGATGAAGGATAAAGATGGTGAAATTCCTTTGTATGGCGAGATAATGGCAGGAGGATGCGGAGGCGGAGCACAGGTGCTGTTTACCAATCCGATTGAAATTGTGAAAATCAGGATGCAAGTGGCTGGGGAGATTGGTGGACAGAAATCCTCGGCCGTGACCCTCTGTAAAGAATTGGGCTTGTTTGGATTGTACAAGgGTGCAAGAGCATGTTTCCTACGTGATATACCATTCTCAGCGATTTATTTCCCATGCTACGCTCATCTCAAGGAGTACTTGGCTGATGAGAATGGCTGGAACAACTGGCATACCTTGCTTATTGCTGCGGCTGGAGCAGGTGTACCAGCAGCATACTTAGTCACACCGgcggatgtcatcaaaacacGTTTGCAAGTGAAGGCAAGGCGTGGCCAGCAAGCATATCGTGGCGTAGTCGACTGTTTTAGGAAAATCTTGGCAGAAGAAGGTGCTAAGGCATTTTGGAAGGGCGGTCCTGctcGTATATTCCGCTCATCGCCACAGTTTGGTGTGACGTTGCTTGTTTATGAAATGATCCAAAGGTTTTTCTATGTTGATTTTGGAAGCGGCTTGCCAAAGTCTGAGCTGGCTCCAGTCAATCCGGAGGTTTCCAAGCATCCGGACCACATCGGAGGTCTCCGGTTGGCGGTGTCGACATTCTCCGGTATCGAGACGAAATTTGGACTGTTTTTACCAAAGTTCCACGCTTCTCCGGTAAGACCAATTAAACCAGAAGCTGTGACAATGCCCGTTGCTCCGATAATGCCAGTTGAAACCAAAACAATCTGACACTGTTTATAAtcaaatgatgaaatatgaatGTAAGGTAagtaaatgtttttattgcatGTGACGTTGTTAGGTAATTTATCCTGGTTCACGCATGTTTGGTAGGAAAAAAAGGCAAGATAACACTTGATTAGTGCCTTATTTTAATTAATACGTTCACTGCAAAGTATCTTAAACATgttatgaatttttttatCAAGTTGTGGACTGAATGTTTAGGAGAGTGAAAACGCTAATCGTTGATTTTGTACATGaaaatcatttattttaaagttgGTAGGCATTGAAATAATAAGTTCTGTTTCTTTGAGAACTCATGTTTTGGTATCAGCAGATGTAATCTCATGATACTGTGGGGGTTTTTTATTATGATGCTCAATGTTCACATGTAACTGTTTGATATATGATGCCTGGTAAATTGTTGTGATGAGTTCGTAAGATCAAAAGTCATGCTACAAATGTCTACTGAGATTACTAGAAGATGTGATGCTACTAGAAGATTCATGCACGGTGGAGTTGTTGGGTTGAAAAGCTTGATCATTGTGGGTGGAAGTGCTTAATCGTCAACATTGTAATTGCATCTAGCTTAGCATTAGCAAGCCTGCAAGCCTTGGATTGCGATGAGCTTATGTTACAAGATGCTGATAATGATG

Protein

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00036 all species →	EF-hand_1	EF hand	Domain	Interproscan
PF00153 all species →	Mito_carr	Mitochondrial carrier protein	Repeat	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR002048 all species →	Domain	EF-hand domain	Interproscan
IPR023395 all species →	Homologous_superfamily	Mitochondrial carrier domain superfamily	Interproscan
IPR002067 all species →	Family	Mitochondrial carrier protein	Interproscan
IPR018108 all species →	Repeat	Mitochondrial substrate/solute carrier	Interproscan
IPR011992 all species →	Homologous_superfamily	EF-hand domain pair	Interproscan
IPR051028 all species →	Family	Mitochondrial Solute Carrier	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR45678 all species →	MITOCHONDRIAL 2-OXODICARBOXYLATE CARRIER 1-RELATED	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0005509 all species →	Molecular Function	calcium ion binding	Interproscan
GO:0055085 all species →	Biological Process	transmembrane transport	Interproscan
GO:0005313 all species →	Molecular Function	L-glutamate transmembrane transporter activity	Interproscan
GO:0006810 all species →	Biological Process	transport	Interproscan
GO:0015183 all species →	Molecular Function	L-aspartate transmembrane transporter activity	Interproscan
GO:0015810 all species →	Biological Process	aspartate transmembrane transport	Interproscan
GO:0015813 all species →	Biological Process	L-glutamate transmembrane transport	Interproscan
GO:0022857 all species →	Molecular Function	transmembrane transporter activity	Interproscan
GO:0043490 all species →	Biological Process	malate-aspartate shuttle	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

KO	Enzyme	Enzyme ID	Pathway	Map ID	Source
K15105	SLC25A12_13, AGC; solute carrier family 25 (mitochondrial aspartate/glutamate transporter), member 12/13	-	Transporters	ko02000	deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.