Gene detail

Detailed information of ENSYDOP00000000355.1 in Millepora dichotoma

Genomic Location: :...
NR annotation: XP_043946238.1, ranBP-type and C3HC4-type zinc finger-containing protein 1 isoform X2 [Protopterus annectens]

Gene Structure

More details in Jbrowse

Sequence

CDS

Transcript

Protein

Uniprot

Gene family

Uniprot term	Description
Q9BYM8	RanBP-type and C3HC4-type zinc finger-containing protein 1 OS=Homo sapiens OX=9606 GN=RBCK1 PE=1 SV=2
Q9WUB0	RanBP-type and C3HC4-type zinc finger-containing protein 1 OS=Mus musculus OX=10090 GN=Rbck1 PE=1 SV=2
A9JTG5	RanBP-type and C3HC4-type zinc finger-containing protein 1 OS=Danio rerio OX=7955 GN=rbck1 PE=2 SV=1

Gene family	Subfamily
Ubiquitin Family	E3\|E3 activity RING\|RING
Ubiquitin Family	E3\|E3 activity\|RBR

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00097	zf-C3HC4	Zinc finger, C3HC4 type (RING finger)	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR013083	Homologous_superfamily	Zinc finger, RING/FYVE/PHD-type	Interproscan
IPR001841	Domain	Zinc finger, RING-type	Interproscan
IPR044066	Domain	TRIAD supradomain	Interproscan
IPR017907	Conserved_site	Zinc finger, RING-type, conserved site	Interproscan
IPR051628	Family	Linear Ubiquitination-Associated E3 Ligases	Interproscan
IPR047558	Domain	Heme-oxidized IRP2 ubiquitin ligase 1, BRcat domain	Interproscan
IPR018957	Domain	Zinc finger, C3HC4 RING-type	Interproscan
IPR047557	Domain	Heme-oxidized IRP2 ubiquitin ligase 1, Rcat domain	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR22770	UBIQUITIN CONJUGATING ENZYME 7 INTERACTING PROTEIN-RELATED	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0000151	Cellular Component	ubiquitin ligase complex	Interproscan
GO:0004842	Molecular Function	ubiquitin-protein transferase activity	Interproscan
GO:0043130	Molecular Function	ubiquitin binding	Interproscan
GO:0043161	Biological Process	proteasome-mediated ubiquitin-dependent protein catabolic process	Interproscan
GO:0097039	Biological Process	protein linear polyubiquitination	Interproscan
GO:0046872	Molecular Function	metal ion binding	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
K10630	RBCK1, HOIL1; RanBP-type and C3HC4-type zinc finger-containing protein 1	EC:2.3.2.31	Ubiquitin system	ko04121	deepkoala