Gene detail

Detailed information of ENSYDOP00000003707.1 in Millepora dichotoma

Genomic Location: :...
NR annotation: KFO21219.1, Telomeric repeat-binding factor 2-interacting protein 1 [Fukomys damarensis]

Gene Structure

More details in Jbrowse

Sequence

CDS

Transcript

ENSYDOT00000003846

TTAAGGGAGTTTTACAAACTTTGTAAAGAAGATTTAAATGGATGCCAGCAATAAAGCACGTTTATTTGATGGGCTAACGTTCTTCATGAGACCAGGCGACAAGCGCCGTGAAATTCGTCTCCTAGTAATAGAAAATGGTGGGCAATTTGTTGGAATAATGGAAAAAGATGCCAACAGggtACCACAATATGGGAGAGAAGGAAAGGTCACATCTTCAACTATATCTGTTGATGTTACTAAAGTCCATAAAGGaCGTCAGAAGTTTGACCCAGAGGAGGATGACGCAATTATGACTTACGTTGCAAAATATGGCAAAGAATTCGGAGAAATTAGAAGTTTGACCGGAAACTTGATTTGGAAGGAAATGGAAAAGAACAAAGTGACAATTCACACTTGGCAGTCAATGAAAGATCGGTATCTCAAACATCTTCAACACCGACCTCCACCGCACCTTTACGAACCTATCACATTCAAGTCATCAGATGGAGAAGTGATACAGTTTGCCAATGTAGCTGGCGGAAACAGTAAATCTACAATCGAGAACAAGATGTTATCAAGAAAAGTGGTGCCTGAAAAAGAAGCAACTTTAAAACAtgcgaagaaaaagaaaaagttaatgaaatcgAAGACAGATTTATTTGCAGAAAGTCCACGAGAAAATCGAGCTGAAGATCCAACAGCATCTATAGAtgtattttcttcatcaaatgaaGACATGCCAGATGTGAGACAAAAGATCAATATACTCAACAGTTGTGACAGATTACCTACTGATTCACTGCGTTCAGACCAAGAACGTCTGTCGACGTCATCTCAGGATGTTGCCATGTTACACCCTACAGTTTTGGCTGAAGATGCTGATCAATGCAGCAAGGGAAAAAACAAGTCAGATGTAAAAGCATCAGCAAAAGCATCGGAATCTACAAAAGAAATcattgaaaccaaaaaaagtattgaagataATATCGAACAGAACAGGGTAGTTGCTAAggcaaatattcaaataaaacattcaaaaattaccGCAACTTTGTCAAATAAAACTGATTGTGCAAATTTGCtgagtaacttttttaaagcaCAGGGTAGCGAGGAGATCCAGGAAGACAACTTTGTGGAAGCTAGCACATGTAATGATGTGGCTGCTGATGCCAAGATGACCAATGCAATGGAACTTGATACTGAGAATAAAGGTGGTGATCGTGTAATTGGAAGTGAAGCGACATATTCGGAAGACCAAGATGAGGACTTATTTGTCTCAGTAAATTCTACTGAATCCCCAGAATGTCGACGATTACAACCACCGAAATTCTGTTCAACCACCACTAAAGAGACCGATGTTCATAACAGCACTTCGAACATGGAGCTTGACAAAACAGAGGATTCATTTGACACTATTCTTATGAAGCAAGCGTTAAATGGAGAGGAGAACTCAAGCGGTGACTGTATTGATAGCTCATCAAACAGTTCATCAAGTTCAGCTTCGGGAGCTGGTCGCAGAAAAGATAATGAAGATGACAACGAGATTATTTCCGTGTACCTTCGTTTAGCTGATGatgaagaaaatatcaacaaaatggACGCGGTTTACACGAAAATTAGCGAGAAGATTAACGAAGTTGATGGAAACAATGATATCTGGAAAGATTTGAGATCTCAGCTAATACTCAGTgAATTAATGTTTGAAAACAACATCAACTACGACGAACTAGTGCACGAGTAGAGAACTTAAGGTTGTCCTTCcctttgaaaataactttcaagaaaatgtttttagcaacaaaaaattgaaggtaacaaaaaaatgtatgacaaaaagtaattttttttttgatcagttttaagaatttatattttataacaatttactgcttttaccagaaaattttttgtaCCGCCATCTAAATTACGAATAACTTTGGAAACTGTAACTCATATAGGTGGACATATGCTTCCAATAAAATACCTTGtctcattaatttgaaaaaagtttcagtgCTGATGCTTTTGTGTAAAGAAGTTGTcac

Protein

Uniprot

Uniprot term	Description
Q9NYB0	Telomeric repeat-binding factor 2-interacting protein 1 OS=Homo sapiens OX=9606 GN=TERF2IP PE=1 SV=1
Q6NYJ3	Telomeric repeat-binding factor 2-interacting protein 1 OS=Danio rerio OX=7955 GN=terf2ip PE=2 SV=2
Q91VL8	Telomeric repeat-binding factor 2-interacting protein 1 OS=Mus musculus OX=10090 GN=Terf2ip PE=1 SV=1

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF08914	Myb_DNA-bind_2	Rap1 Myb domain	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR015010	Domain	Rap1 Myb domain	Interproscan
IPR009057	Homologous_superfamily	Homeobox-like domain superfamily	Interproscan
IPR039595	Family	TE2IP/Rap1	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR16466	TELOMERE REPEAT-BINDING FACTOR 2-INTERACTING PROTEIN 1	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0000723	Biological Process	telomere maintenance	Interproscan
GO:0006355	Biological Process	regulation of DNA-templated transcription	Interproscan
GO:0010833	Biological Process	telomere maintenance via telomere lengthening	Interproscan
GO:0042162	Molecular Function	telomeric DNA binding	Interproscan
GO:0070187	Cellular Component	shelterin complex	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
K11113	TERF2IP, RAP1; telomeric repeat-binding factor 2-interacting protein 1	-	DNA replication proteins	ko03032	deepkoala