Gene detail

Detailed information of ENSYDOP00000013019.1 in Millepora dichotoma

Genomic Location: :...
NR annotation: XP_032239940.2, DALR anticodon-binding domain-containing protein 3 isoform X1 [Nematostella vectensis]

Gene Structure

More details in Jbrowse

Sequence

CDS

Transcript

ENSYDOT00000013415

GTCAAAGAGAATGAGCAAAAGTTCATCGAGTCATTTAAAATCGAAAAACGGACCATAATTAACATCAGTTTGAAAAGGTCAGTGGTATTGCAACACGTGATGATGTTTCCCAATAATGGAAACGTGTTatccaaagaatttttgaagaactctacAATAGGATatacttatgaaaaaataatatgctATTTAAAAAGTAGTGACATGGACAGTATCGGCTCTTGCAGGAATTTACTGCTGGCTTCTTCAATATgtcaaatacaacaaaaattctttcaGGATATACCACAGTTACACATGGTCCTGTGGTCAGATCATCAAAACAGATATTTGCATAAACAGATGTATTTCAAAGATATTAGACAAACGTTTCAACGGAACTTTTTAAGTGAAGTTTTTGAATATGAGGATACTGGAgatgaaatgcagaaaaaattagaGGGTTTAATCGTTACtttaaagaataattcaaaagtGAAGAAAGACGAAAACtcgttttattttaataaaaaagacttaaaccCAGGTCAGGCAGAAGGGAAACTGTTTGTGGTGAAGCATGGGCAAGTGACAGATATTATTAAGTTGCTGTCGTGTATGCAGAATGTACTGGAAGGCTCGGAGAGTTGTTCAGGCGTATTACAAATTTGCTCCACACGAGATCTATATAAAGTTCAGTCCGCTTCGTCGTTGCTAAATTTGCTGATGGATACACCAAAACAGttttattgttCATACGAAGAGATGGTAGATGGGCCGCATGCTGAAAGTTATAAGATGACGTCATGGCTAAGCGAACGATCCAAGGAATTATGGGAATCATACAAGATGAAATATGGAAGCCAAGTTGAAGGTCCAATCTGGGGAAAAACAATAGACGAAGTTACAACTGCATCGTTAAAACTAGATGTATTATCGACCTCTTTAAACAAAAGGATAACAATCACAGCACCAGAAGATGTCAATGCTAACTCCTCTCGCAGTAGTTTGTTCATATTGTACAATTACGCTCGCTTGTCGAAGATCTTGCAACACTTTAATGAAAGGGTGAAGGAAGgtACGTACAAACCCATGATGGATTTAACTACAGTTAATTTTGCGTTACTGAAAGAAGAGAACGAATGGAATTTGATTTTGCGGTATGTTTTGTATCATCCCATATTGTTGATGGAGATAATCGACTCGTGTATAGGAGGTAGCACTGCCAGTAAAAGAAATGTTTGTCTCAATCAAGTCTACCAGTTTTTGTTCCAAATGGTTCATGACATCAGTACCTACTATCATCAAACCAAGGTTTTACTGGACCCACAGCCTCATTTGGAACAGCTGACGCATGCAAGACTTTATCTCGTTGCCACATTGAAGAAAATCATGGAAGAGTGCTTTGAAATTCTTGGAGTGGAGGCTCCAACGCAGAtgtgaaagaaatatataatatatggaAGGTTCTGTGACAATTAATATATCTACTGATATTAGAACGCGTATAAAACGAATGAAGCGATTGTTtaagctgaaaaatatttgaatttcaaaattaaaagaaaggacCTCATGGAGTCAAAAGgaactttgaacaggcaaacgcCGGCTAGACCACAGGATTCTCCCATAATAGCATCTATTGAATGTAGCCTTTGTTGTTCAATTATCAAATActaaaatttggaataaagaAATTGTTGAGACTAATCACAATGAGACCGTTTACAGATCAGCTTGAAcgctttaatgcataatatcccaaaatggtcagacaaactttaaaaatcttgcagcatttgctgcaaaatttttaaagtgtgcctgactaTTCTGGGGCAtatgcattaaagtgttaaaacaGTCAGCAATACCAAAAACGTATCAATTATAATACAGAAGGAAACATCAAACATTTACGTTTTATGTACCACACGGCGAATAAAACATCTaagtaattataaataaaacaatttaagaaaaaaggttGCATGAAAGGAAACAGCTACTAGTGATATATTTGTAACTGGTGATATTCAACAAACTGTATATGTATAACGCGAGAAATGTTAATGTCGTAATTCCTTATGTGTCGTAATCTTTGACAGAATGTTTCTATGAAATATAAGCAAATGAAAGTTTG

Protein

Uniprot

Uniprot term	Description
B2S0U2	Arginine--tRNA ligase OS=Borrelia hermsii (strain HS1 / DAH) OX=314723 GN=argS PE=3 SV=1

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF05746	DALR_1	DALR anticodon binding domain	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR008909	Domain	DALR anticodon binding	Interproscan
IPR037380	Family	DALR anticodon-binding domain-containing protein 3	Interproscan
IPR009080	Homologous_superfamily	Aminoacyl-tRNA synthetase, class Ia, anticodon-binding	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR16043	DALRD3 PROTEIN	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0004814	Molecular Function	arginine-tRNA ligase activity	Interproscan
GO:0005524	Molecular Function	ATP binding	Interproscan
GO:0006420	Biological Process	arginyl-tRNA aminoacylation	Interproscan
GO:0000049	Molecular Function	tRNA binding	Interproscan
GO:0106217	Biological Process	tRNA C3-cytosine methylation	Interproscan
GO:0000166	Molecular Function	nucleotide binding	Interproscan
GO:0004812	Molecular Function	aminoacyl-tRNA ligase activity	Interproscan
GO:0006418	Biological Process	tRNA aminoacylation for protein translation	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
K24973	DALRD3; DALR anticodon-binding domain-containing protein 3	-	Transfer RNA biogenesis	ko03016	deepkoala