Gene detail

Detailed information of ENSYDOP00000014232.1 in Millepora dichotoma

Genomic Location: not available for this species
NR annotation: XP_002167951.3, uncharacterized protein LOC100205317 [Hydra vulgaris]
Species Millepora dichotoma · all data for this species · gene families

Sequence

CDS

ENSYDOT00000014668

ATGGTTTCCTTTACTTGGTCATTACCTTATAGTACAGCATTTAACAGTGTCCCTAGAGACTTTAAAAATCAGGATATGtGGGTTCCAGCTATGGTTTTGTCTAGAAGCCTCTTTCATTTGATTACAGGCTCAGGTGAAGATCTCCATGGTAGCACCCAAAGCAGAAGCTGgaacaatttaattaatatcgAGAAAGCTAATACATGTTATTCCTCCGCTGAAGAAAGTGACACCCCAACTGACAAAGCAGAAAAAATCAAGGAGTTCAATCGTAGATCTTTTATTGGGAAAAGTATAAGTGTTGACATATATCATAAGGACCAAGGATTTTCTTCAAGTAAAGTAAGACGCAACggattaattaattttgattcgaaatcatttgattcaaatacagatgatgatgaatttttagCTGGATTagctgattttaagaaaaattataaaaagcaaaagaaaagggaATCATCCGgtttaaagtttgcaaaatcagttgaaaatttattgaagttagATAAAGGTGGTGATGCCATTCAGCGAAGTAGATCCAACACAGAAATAGTGGATGTGAAACCAGATtcaaagaaatctacaaaatccaacaagaaatttttcccaaaatacaACAAAACTATGGATAATCTTCGTGAAACTAGTCTACTTGATGATGAATATTCCCTTGATATTTCTGTTGAACGTGTAACAAAAATAGCAGGTATCATCGAGATGTATCTAGATCAAGATGGTAACGTAATACgtaaagttgaaattcaaaaagttCCAGGTCAAAGTTTAGGATTTTTCATTCGTTTTGGCAATGGGATTGAAAGACTAGATGGTATATTTATATCACGAGTTACATTAGGGAGTTTTGCTGACGTAAACAATTTATTACATGCTGGTGATCAGATTATAGAAATAAATAAGGTCGACGCTACTGGCCTCACTCTAGAAGAAGTTGCGGAAATAATGCAAAGTACAAAAGTTCTCATCATAAAAACGAGATCTGCATTACCTTTACCACTACATGCACAACCTTTATTAACTTCATATCAAAGAATTGAAGATATAAGGTTTCCTGGTTTACAAACTCGGTTTTCAGATACTCAACCGCAACAAACACTAACTATAAACAGGCACAAAGAACTTACACGCACAAAGAGTGATCCTGCGTCTgtaatatataatacattaaaCAATTCAAGGAGAGATCGTTCACAGACAGGCTACCCGGaagatataaataataattacactGAAAATACAAACatgaaagataaacaaaaaaataaaattggttttaaaaatgtgaaacaaGGACCACGCAGTCCACAAGCATATCGAcaatttgcaaaagaaattattacagtaaatgaaaatataactgcAAGCAATTTCTCCAGGGCCGAAAAATATAAAGCCCCACCAATAATTGAAGTTGAAGAGGTAAGAACGAACAAAACGACAAAAAGCTTTATAAAGTCACCTAAATTATTTCGTAAATCTGAGAAGAAAAATAATAGTGAAGCTCCTAAATTTTTCATGACTATCGATAATTTATCGTCATCAGCATCCGATACTGACGACAATAATAGTGAAAACTACGAAAAATATAAATCTGATAGCACAGTGTATGAtcgaaaagaaataaaaagttatagcGGAAAATTAACAgtcaacattattaaaattttaaatttcaaacttcGAGCTAATTCAACGGAATTGATGATTTCTAAAGAAACAGTTGGTTCAAAAGATGAATGTTTTTGTACCGTGGAAGTTGATGGGGAATGTAAAGCAACCACACAGtgtcaaagaattaaaaacaatatcctgTTTGATGAATCCTTTGAATTGGAATTACGGAACTCACATGCGATTaccttttatatatttcttaagagtgaaaaacaaaagcaaaatcgaTTATTAAATGAAGGGTGcattcatttagaaaattttttcaagataaatccTAATAATAACAAGTCCAAAAAGTTTATCTTAAAAACCGATGTACACactgatataaaattatcaatagaCTTTGTGGAGGCAAAAAATCTATTACAGCGTACTCCTTCTACCAGATCAAGCGGagtatttggttttaatttgtctCAAACATTAGTTAAAGAGGAAAATACGATACCAATTTTAGTTCGAAAATGcgttgaagaaattgaaaaaagaggaTTAAATTTAACTGGTATATATCGAATCAGTGGAAATgctaaaaagaagaaattcttgCGACAACAATTTGAAGAGTTTAGTTCCAATGTTGATGTTAGCGAAGAAGCCGGTATTGACTGTCACGTGTTGTCAGGTTTATTGAAAGATTATTTAAGGGAATTACCAAATCCTTtaatttctcaagaaatttatttaaatctataCAATAAATCTttagaacataagaaaattcttGCTGATTCGGTCATCCCAGAAAACCCTGAACTGGATTCAACTGACTTAGGCAACGGCCACTCAAAAAAACGCGTTAGTAGACAAAATGATCGTATTTTGatggatttaatgaaaaaattaccaCTAGCAAATAGAGCCACATTAATATTCATAATGGAACATTTACATAGAATCATTGAgcataaagaagataataaaatggATGAGAAAAACTTAGCGATATGTTTTGGTCCAACAATGATGTGTCCGCCAATTAATTCAAATGCTATTAGTGAAGTTttcgattttaaaaaacaaattcaagcattagaatttttgtttaagatatgGCCCCAAAAAGTtgctcaaaataaaatttaa

Transcript

ENSYDOT00000014668

Protein

UniProt (Swiss-Prot top hit)

UniProt accession	Description
Q5VT97	Rho GTPase-activating protein SYDE2 OS=Homo sapiens OX=9606 GN=SYDE2 PE=1 SV=2
Q9V9S7	Rho GTPase-activating protein 100F OS=Drosophila melanogaster OX=7227 GN=RhoGAP100F PE=1 SV=2
Q9DBZ9	Rho GTPase-activating protein SYDE1 OS=Mus musculus OX=10090 GN=Syde1 PE=1 SV=1

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0007735 (this species only)

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00595 all species →	PDZ	PDZ domain	Domain	Interproscan
PF00620 all species →	RhoGAP	RhoGAP domain	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR001478 all species →	Domain	PDZ domain	Interproscan
IPR036034 all species →	Homologous_superfamily	PDZ superfamily	Interproscan
IPR000198 all species →	Domain	Rho GTPase-activating protein domain	Interproscan
IPR052118 all species →	Family	Rho GTPase-activating regulator	Interproscan
IPR035892 all species →	Homologous_superfamily	C2 domain superfamily	Interproscan
IPR000008 all species →	Domain	C2 domain	Interproscan
IPR008936 all species →	Homologous_superfamily	Rho GTPase activation protein	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR46150 all species →	RHO GTPASE-ACTIVATING PROTEIN 100F	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0005515 all species →	Molecular Function	protein binding	Interproscan
GO:0007165 all species →	Biological Process	signal transduction	Interproscan
GO:0005096 all species →	Molecular Function	GTPase activator activity	Interproscan
GO:0016477 all species →	Biological Process	cell migration	Interproscan
GO:0046578 all species →	Biological Process	regulation of Ras protein signal transduction	Interproscan
GO:0097060 all species →	Cellular Component	synaptic membrane	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

No KEGG orthology assignment for ENSYDOP00000014232.1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.