Gene detail

Detailed information of ENSYDOP00000014420.1 in Millepora dichotoma

Genomic Location: :...
NR annotation: MCH2377509.1, hypothetical protein [Pelagibacterales bacterium]

Gene Structure

More details in Jbrowse

Sequence

CDS

ENSYDOT00000014877

GATCCATTATGCTGTGAAAACGGTTGGAAAATTATATATTGCAATAGCCGACAACTATCCAAAGCAGAACAGAATTATGCACCAATCGAAGGAGAGGCATTAGCTGTAAAATGGGCATTGAAAAAAGCCCGAATGTTTTTATTAGGAAGCCAGTTCCATATTATAGTTGATCACCaaccattattaaaaatatttggagATATCCCGTTGGACAACCAGATTCTGATGATAGAATTATCAAACTCACTTGAACTAGCTTCCGtagatttgataaataatattactAGCAGCTCATTATCAATAACAGTTGAAATAGTAAAAGAAGCTGCTAGAGAAGATGAACAGTATCAAACATTATTATCTACCATCCGTAATGATTCATTTGCCAAAAGTGCATTTTGTGAAAACCCTAtaataaaagacttttataatGTAAGGGACAGATTAAGTATAGTAAATGACTTAGTTTTGTAtggatttgaagaaaaaaatttacgaGTAGTTATCCCGAAGAAACTTCAACATCAGATGTTGCTAAATTTACATATCGCAAATCAAGGTGCAACATCAATGCTTGCTCGTGctcgaaaaattatttattggccAGGCATTGATCAAGACATAACATCACACGCACTATCATGCATGAAATCACTAAAATCATATGATAACAAAAACTCCCTatcttttttccatataaatgcatgctcattgaacaaaaactttgatgatctGGATATACATAATTATCACTTCATATGTATCAGCGAAACTTATCTAGATTCTACAACAAATTTAGACGATAAAGATCTTGCTATTGAAGGTTACAATATAATTCGTGCTGATCATCCCAACAATCTTAAAAAAGGAGGTGTATTATTATATAGATCTCCCAGTCAAAATAGCTCCGAATTTGATAACTTTCTGTCAGGATTTGAAAACATGcttaatctcattaattcttttaaaccAGACTTTACAATTATCCTTGGGGATTTTAATGCCAGATCAAAATCTTGGTGGAATAAAGTTACAAATTCGAATGAAGGTACTAAAATTGACGCTCTGACCTCATACCATGGACTATATCAGTTGATATCTCAACCAACACATATTTTAGCAAATTCGCCTTCTTGTATTGACGTCATATTTACCGACCGACCAAATTTAGTAGTTGATTATGGTACTCATCCTTCTCTTCATCCTAACTGCCATCACCAAATTATTTATTGCAAGCTAAATCTTAAAATTGCATATCCTCCTCTCTATCAAAGACTGGTATGGGATTTTAAAAGGGTTAATATTGATTCAATTAGGAAAGCAATTAAAATAGTTGATTGGCATTTCatgtttctaaataaaactgTCCATGAAcaggtttctatttttaacaatatattatttaatatctttacCAACTATATTCcccataaatatatattatttgatgacaGAGACCCACCATGGATGACTAaacacataaaagaaaaattaaatttgaaacgaTCTCTCtataagtcaaaaaattttattgatttacaaaatttatcaactgAAATATCTGAAATGATCTCTGTAAGGAAAGAAGAATATTATCTCCATCTGTCTAAGAAATTTAATGATCCAAGTACTAccaaccttttcaatgattttttctctttccaaTGTACTCCACTATCTAACGAAAattttgataaaaatgatattcttaaaataataagaaatctaAATGttaacaaagctcatggtcatgatgatatttcaataagaatgttaaaaatttgtgattcAGTGGTCACTGAACCcttatctattttatttaagaACTGCATTAATTGTGGAATATTTCCCAACGTTTGGAAAATGTCTATCAtaccaacttataaaaaaaatgataaacgttATATAAACAATTACCGTCCAGTGTCTCTGCTCCCAATatgcagtaaaatatttgaaacaataataTATAATCCTGTATTTTTATATCTTGAAAGCAATAACTTACTTACaccaaatcaatctggttttcgtccTAATGATTCCTGCATAAATCAGCTTTTATCAATAGTTCATAAAATCTATTCTGACTTCGATGAATATCCATCTCTTGAAgtaagaagtaattttttagatatttccaaaAAGGCCTTTGACGTATCTTATTTGAGTGAACGGCTACAATGTGTCAAAATTAGACAAACAGTATCtgattttacaaaattacttgtggagttccacaagggagTGTTCTGGGGCTCcttctgtttttga

Transcript

ENSYDOT00000014877

Protein

Uniprot

Uniprot term	Description
Q9NBX4	Probable RNA-directed DNA polymerase from transposon X-element OS=Drosophila melanogaster OX=7227 GN=X-elementORF2 PE=3 SV=1

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF17917	RT_RNaseH	RNase H-like domain found in reverse transcriptase	Domain	Interproscan
PF17921	Integrase_H2C2	Integrase zinc binding domain	Domain	Interproscan
PF14529	Exo_endo_phos_2	Endonuclease-reverse transcriptase	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR036691	Homologous_superfamily	Endonuclease/exonuclease/phosphatase superfamily	Interproscan
IPR043502	Homologous_superfamily	DNA/RNA polymerase superfamily	Interproscan
IPR041373	Domain	Reverse transcriptase, RNase H-like domain	Interproscan
IPR041588	Domain	Integrase zinc-binding domain	Interproscan
IPR005135	Domain	Endonuclease/exonuclease/phosphatase	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR33395	TRANSCRIPTASE, PUTATIVE-RELATED-RELATED	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0003824	Molecular Function	catalytic activity	Interproscan