Genomic Location: :...
NR annotation: XP_002162674.3, RGG repeats nuclear RNA binding protein A isoform X1 [Hydra vulgaris]
| CDS | |||||
| ENSYDOT00000015320 | |||||
| Transcript |
| ENSYDOT00000015320 |
| Protein |
| ENSYDOP00000014834.1 |
| Uniprot term | Description |
|---|---|
| Q6AXS5 | SERPINE1 mRNA-binding protein 1 OS=Rattus norvegicus OX=10116 GN=Serbp1 PE=1 SV=2 |
| Q9CY58 | SERPINE1 mRNA-binding protein 1 OS=Mus musculus OX=10090 GN=Serbp1 PE=1 SV=2 |
| G1SW77 | SERPINE1 mRNA-binding protein 1 OS=Oryctolagus cuniculus OX=9986 GN=SERBP1 PE=1 SV=1 |
| Pfam accession | Pfam name | Description | Type | Source |
|---|---|---|---|---|
| PF04774 | HABP4_PAI-RBP1 | Hyaluronan / mRNA binding family | Family | Interproscan |
| PF00098 | zf-CCHC | Zinc knuckle | Domain | Interproscan |
| InterPro term | Type | Description | Source |
|---|---|---|---|
| IPR039764 | Family | RNA binding protein HABP4/SERBP1-like | Interproscan |
| IPR006861 | Domain | Hyaluronan/mRNA-binding protein | Interproscan |
| IPR036875 | Homologous_superfamily | Zinc finger, CCHC-type superfamily | Interproscan |
| IPR001878 | Domain | Zinc finger, CCHC-type | Interproscan |
| PANTHER term | Description | Source |
|---|---|---|
| PTHR12299 | HYALURONIC ACID-BINDING PROTEIN 4 | Interproscan |
| GO terms | Category | Description | Source |
|---|---|---|---|
| GO:0003723 | Molecular Function | RNA binding | Interproscan |
| GO:0005634 | Cellular Component | nucleus | Interproscan |
| GO:0005737 | Cellular Component | cytoplasm | Interproscan |
| GO:0003676 | Molecular Function | nucleic acid binding | Interproscan |
| GO:0008270 | Molecular Function | zinc ion binding | Interproscan |
| KO | Enzyme | Enzyme ID | pathway | mapID | Source |
|---|---|---|---|---|---|
| K13199 | SERBP1; plasminogen activator inhibitor 1 RNA-binding protein | - | Spliceosome | ko03041 | deepkoala |