Gene detail

Detailed information of ENSYDOP00000014907.1 in Millepora dichotoma

Genomic Location: not available for this species
NR annotation: XP_012554673.2, bromodomain-containing protein 1 isoform X3 [Hydra vulgaris]
Species abbreviation MDICH · all data for this species · gene families

Sequence

CDS

Transcript

ENSYDOT00000015398

GGATTTTTCTACCATGCGACAAAAATTAGCTGATTACGAATATGTCAATTTCGATTTGTTTGAAAGTGACTTTAATTTAATCATACGTAATTGTTTGGATTTCAACCAAGAAGATACTGTTTTCTATCGCGCTGCGTTGCGGATGCGTGCACATTGTAGACCTATCTTGAAACTTGCGAGGAAGAGGATTCGACAGGCAGGTATTGATCCGGAAACAGGAATGCATATGGCAAAACCACAGCTTATTGATGTTGATTGTGGTAGTCCAACCGAAGACGatGTTTCAGCACTTCTTAAAAATCCATTCATGTCAATTGATGAGAAACTGGAGGACCTAGAAATGAAATTAGAGATATCAGATACTATCAAAAACGCATTAGTGAGATTGGCACGTCAGAAGGCTTTGCGGAAAGAAATCGCCAAGTTGAAAAGACAGAAACGGAAATTAGATCATCCAAACAACAGTTCAACGGAACCTGAATCATCAAGGGTTTTAGATGGCACGGACGACGGTAATCTTCTAGTGAGACGCAAAAAGCACCGCAAGAGATACAATGGCGATGTTAAAATACCACCAAGTGAAAAGAATATTACGTTATCGCACGATGAAAACGGGGAAAATAATGTATTTGTCAGTAAGGATAATGAAACAGGGGATGAAAGTGACAGTGCAACTATTtcaattataaaactaaaaactccAACAAAATTGTCAGCACCAACCTCTCTTAATTTAGATCCTAATGAGTCTTTGACGTCACAAGTTAAATCACCTCTTAATGGCGCTTCTCCAGAAAGGTTACTTCCAATAATTTTGGAACCTGCAAGGGTTGTCCGTAATCCATCTCCAGGACGTAATAGACGGAGTggtatattgtttaaaaagaaacaataccAACCTGCTAAGCCGAGTCCATTGGTAATATATAGTTCCACCGCAAGTGACGATGGTAACCCCAAATCTCCcataaaattacatctaaaacttaaagaaaacccagacttaaacaaaatcagaagtGAAAATGATGACCCTAATGCAAGGACTTACATGAATCTTGACTTTTGTAAAAGAATTAGTCCAACCAAACGAGAAAATACAATTCATCTGAGTGATCACATTGCGACTGTGAACGGTCATACAAAATTTAATGGTAATTTAGAAACacaatcaaaatttgatgaatgtgAAAACGAAAGCACGTTACCACAAAAACGAACTCGTAAACGAACTTATACAAGTAGTTCTGATTCGGACGGTAACGCTACGAAAGAAAATAAACGAAAAGTGCACAGGAGAGGTCGTCAACGTAGTGCACGGTTATCATTTGAAGATGAATTTGGTAATTTAGACGGTTTGAGTGATATAAAATGTGGCATTTATATGGTTAATAATGACGAAACTCATCTACGGGATCCAAAATCCCATCCTGAAACAATTGACTTCATAAAACTTATCTGGGCTAAATGTAAAGGCTATCCATCATATCCAGCTATGACCATTGATCCGGATATGCCGCGAACAGGTTACCAGTCAAATGGTGTGCCGATTCCCATACCACCACTTGACGTCCTTCAGATGAACGAAAACAAGGAGAAttatttgatacttttctttGACGCAAGGCGAACCTGgCAATGGCTGCCGCGTGACAAAATTGAGCCTCTAGGAATTGACTCACGCTTAGATGAACACAAATTAATCGAATCGAAAAAACCAGCCAAGCGTAAAAATGTTCAGGAAGCTTATAAGCGAGCGATTGCTTTTCGACACAGATTAGAAGTTGGCGAAAACAGTGAAGGAGAAATGTTAGATGATTCTAATGAGAACGACGAAATAGACAGTGACGATAGCGACGGCGTCGAAGATAACGATGCAGATACCACGGAGTACGATGGACTTACGGAGCGTGAATATGAGACTGAAgcaataaataatagtaaatttacGGAACATAATCCTGCTGTTCTTGCAACGTAGCTCTTTTTATGCCAACTGTTAGTAttcgattttttcaaaataccagaGAAGATATTCCAGCTGCCTTGTTTTCGAACTCGTTTTTTATGTCAGCCTCCAATTTTCAATACTCTAAAATTTAGGTCTTTGATAATGTAGGTATTTCTTCC

Protein

UniProt (Swiss-Prot top hit)

UniProt accession	Description
P55201	Peregrin OS=Homo sapiens OX=9606 GN=BRPF1 PE=1 SV=2
B2RRD7	Peregrin OS=Mus musculus OX=10090 GN=Brpf1 PE=1 SV=1
Q9ULD4	Bromodomain and PHD finger-containing protein 3 OS=Homo sapiens OX=9606 GN=BRPF3 PE=1 SV=2

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0005083 (this species only)

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00439 all species →	Bromodomain	Bromodomain	Domain	Interproscan
PF00855 all species →	PWWP	PWWP domain	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR000313 all species →	Domain	PWWP domain	Interproscan
IPR036427 all species →	Homologous_superfamily	Bromodomain-like superfamily	Interproscan
IPR001487 all species →	Domain	Bromodomain	Interproscan

PANTHER

No PANTHER signature was detected for ENSYDOP00000014907.1. This gene does have a gene model — the search simply returned no hit.

Gene Ontology

GO term	Category	Description	Source
GO:0005515 all species →	Molecular Function	protein binding	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

No KEGG orthology assignment for ENSYDOP00000014907.1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.