Detailed information of ENSYDOP00000016758.1 in Millepora dichotoma

Genomic Location: :...
NR annotation: HCX22453.1, hypothetical protein [Cytophagales bacterium]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
A7SEP9U1 small nuclear ribonucleoprotein C OS=Nematostella vectensis OX=45351 GN=v1g244745 PE=3 SV=1
B7Q2M2U1 small nuclear ribonucleoprotein C OS=Ixodes scapularis OX=6945 GN=ISCW020627 PE=3 SV=1
A8XW44U1 small nuclear ribonucleoprotein C OS=Caenorhabditis briggsae OX=6238 GN=CBG19656 PE=3 SV=1

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF06220zf-U1U1 zinc fingerDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR017340FamilyU1 small nuclear ribonucleoprotein CInterproscan
IPR003604DomainMatrin/U1-C-like, C2H2-type zinc fingerInterproscan
IPR000690DomainMatrin/U1-C, C2H2-type zinc fingerInterproscan
IPR036236Homologous_superfamilyZinc finger C2H2 superfamilyInterproscan
IPR013085DomainU1-C, C2H2-type zinc fingerInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR31148U1 SMALL NUCLEAR RIBONUCLEOPROTEIN CInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0000387Biological Processspliceosomal snRNP assemblyInterproscan
GO:0000395Biological ProcessmRNA 5'-splice site recognitionInterproscan
GO:0000398Biological ProcessmRNA splicing, via spliceosomeInterproscan
GO:0005685Cellular ComponentU1 snRNPInterproscan
GO:0030627Molecular Functionpre-mRNA 5'-splice site bindingInterproscan
GO:0003676Molecular Functionnucleic acid bindingInterproscan
GO:0008270Molecular Functionzinc ion bindingInterproscan
GO:0005634Cellular ComponentnucleusInterproscan

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