Detailed information of ENSYDOP00000019651.1 in Millepora dichotoma

Genomic Location: :...
NR annotation: XP_047124611.1, E3 ubiquitin-protein ligase parkin-like isoform X1 [Hydra vulgaris]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot Gene family
Uniprot termDescription
Q7KTX7E3 ubiquitin-protein ligase parkin OS=Drosophila melanogaster OX=7227 GN=park PE=1 SV=1
E0VIU9E3 ubiquitin-protein ligase parkin OS=Pediculus humanus subsp. corporis OX=121224 GN=park PE=1 SV=1
Q9P3U4E3 ubiquitin-protein ligase dbl4 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=dbl4 PE=3 SV=1
Gene familySubfamily
Ubiquitin FamilyE3|E3 activity|RBR

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF01485IBRIBR domain, a half RING-finger domainDomainInterproscan
PF17978zf-RING_14RING/Ubox like zinc-binding domainDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR047536DomainE3 ubiquitin-protein ligase parkin, Rcat domainInterproscan
IPR044066DomainTRIAD supradomainInterproscan
IPR002867DomainIBR domainInterproscan
IPR003977FamilyE3 ubiquitin-protein ligase parkinInterproscan
IPR041170DomainRING/Ubox-like zinc-binding domainInterproscan
IPR013083Homologous_superfamilyZinc finger, RING/FYVE/PHD-typeInterproscan
IPR031127FamilyE3 ubiquitin ligase RBR familyInterproscan
IPR047534DomainE3 ubiquitin-protein ligase parkin, BRcat domainInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR11685RBR FAMILY RING FINGER AND IBR DOMAIN-CONTAININGInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0008270Molecular Functionzinc ion bindingInterproscan
GO:0004842Molecular Functionubiquitin-protein transferase activityInterproscan
GO:0005739Cellular ComponentmitochondrionInterproscan
GO:0005829Cellular ComponentcytosolInterproscan
GO:0000151Cellular Componentubiquitin ligase complexInterproscan
GO:0000209Biological Processprotein polyubiquitinationInterproscan
GO:0000422Biological Processautophagy of mitochondrionInterproscan
GO:0001933Biological Processnegative regulation of protein phosphorylationInterproscan
GO:0005737Cellular ComponentcytoplasmInterproscan
GO:0005783Cellular Componentendoplasmic reticulumInterproscan
GO:0005794Cellular ComponentGolgi apparatusInterproscan
GO:0006511Biological Processubiquitin-dependent protein catabolic processInterproscan
GO:0010821Biological Processregulation of mitochondrion organizationInterproscan
GO:0016567Biological Processprotein ubiquitinationInterproscan
GO:0031624Molecular Functionubiquitin conjugating enzyme bindingInterproscan
GO:0032436Biological Processpositive regulation of proteasomal ubiquitin-dependent protein catabolic processInterproscan
GO:0042981Biological Processregulation of apoptotic processInterproscan
GO:0061630Molecular Functionubiquitin protein ligase activityInterproscan
GO:1900407Biological Processregulation of cellular response to oxidative stressInterproscan

 KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
K04556PARK2; parkinEC:2.3.2.31
Mitochondrial biogenesisko03029deepkoala

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