Gene detail

Detailed information of ENSYDOP00000029309.1 in Millepora dichotoma

Genomic Location: :...
NR annotation: XP_047127954.1, DNA repair protein rev1 isoform X3 [Hydra vulgaris]

Gene Structure

More details in Jbrowse

Sequence

CDS

Transcript

ENSYDOT00000030306

ATAGGGATTCAGATTACAGGGTTAACTGATGCGCAAAGCAAAACTTCCAATCTGTTTGATTTTGTGAAAACGGTTTCTTCTGCACCAGAAGTTCCACAAAAGGATTTATCAGCACCTGTAGTACCCAGTCTGCCAACATGGGACCAGATAAATCGAGGAGAACAAGATAGGATggaatttaaagtgaaaaataattttatcatgaATGATGTTGATAATTGGGATCCCACTATTTTGCAAGAGCTTCCAAAGGAAATCCAGGATGAACTGGCCTCAATCAAGCGACGCAAAAAATCTCCTGTTACGAAAGGTCAACAGTCGCCGAAAAACAAAAGTCCACACAAGGCAAATAAAGCTAGAGCAAGTCCAGCAAAAAGGGGGAGGGGGCGTGGGAGGAAACTAAATGATTCTTTCGACCCAAGTAAATTTGGTGATATAAGGAATCTGGCAAGTAAAAGTGTAAGTATAGATCAAGAAGAACAAGTCATACCACCTGATGTTGATAGGAAGACTTTGAAAGAGCTTCCCAAGCATCTTCAAGCAGAAATTATTGGAAATTTTAGGCGTTCAGGAAAAACTATCTCAGATAATCAAATTGTTTCTggaaaaactacatttaaaacACCATTTCTGAAAACTGATTGTCCAAAGCACGAAAAAAGCCAAGAAATTAATATGagaaataataatttaatgtcCCCGTCGCAGCTCGATCAGTCTTTTTTAGAAGCCTTACCTGATGAATTGAGACAAGAAATAGTTGCAGATGTAgtgaagattaaaaatgaaagactAAAGCAGGAGGTCACTGCTGACGAAAATTTAAAATCGTCTATTCCTGATGATAATACTAAAACTAACAGAACACACACCTCACTGTCCCCATCCCAACTGgatcagtcttttttaaaagaattaccaGAAAACATTAGAACTGACATAATTAATGAggtagaaaatattaaacaaataagaacacatttttcaaggAATCAGAATACAGAAAAAACTTCTAAAGATAATGATGCTGAATCAAAGTCAAGTGAAACCACTAGacttaaaaataatgtatttataaATGACAATCTCTTATCTCCATCCCAAGTTGATATtaatgttttagcagcattaccAACAGAAATTCAAAAGGAAATTATAATTTCAAccaagagaattaaaaaaattcgcacaaataaaattttaaatgaaaataatacgttAAACAGTAAGGTTAGGGAAAACGAACGCAGTGATCTAGTGGACACGATAGAAGAGGAGACAGATGAAGTGGAGATGAAGAAACTTAAACAGattCTGCCGGCTTTGCATGGTGTTTCAGATATCAGTGAAGTAAAACAGATGTTACGTATGTGGATAATTGAATACCCGGAACCATTGGATGAAGATGTGCAGGAAGTTTTGGAATACTTTCGGTTATTGCTGGAATCCTATAACATGGAAAATTTGTTTATCCTTTTGAAATTCTTGAGAAGGTTGGTTACCAACGTTGAAAGTTGGCACGTTTCATTTAACAATATTCTGGCGCATGTACAGTCGAACATGAAAGAAAAGTATTCAGCGTCATTTCCTTTACTTATGTTCCAGGTTCgctaaataaaattgttattttgtacAACAATTTTTATAGATATCTTTATACATACACAGATAATCAACCGATCTTATTCTActgctccatttctatactccctgacgttttcagggagcaTAAAAATGAAACAGTGGTCTAAAAGGGTTTAAAAGTGACAATGCtgatgtaattttgtttcataattttatacaCGCTCTGCTGAAATTACATTGGCTctctttattaatttatttctttttttgtaatatatctgGAACTAAAAATGGTCAACTATTCACAGTAGCAAAAAACAACAGATTATGAAGATATGTATGGACCTGGGCTTTCAAATTTACCCAAGAGAGGCTCATCATCCAAGGTTTCTTtgagttttaagtttcaaccatgCA

Protein

Uniprot

Gene family

Uniprot term	Description
Q5R4N7	DNA repair protein REV1 OS=Pongo abelii OX=9601 GN=REV1 PE=2 SV=1
Q9UBZ9	DNA repair protein REV1 OS=Homo sapiens OX=9606 GN=REV1 PE=1 SV=1

Gene family	Subfamily
Ubiquitin Family	UBD\|Alpha-Helix\|UBM

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF14377	UBM	Ubiquitin binding region	Motif	Interproscan
PF16727	REV1_C	DNA repair protein REV1 C-terminal domain	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR010513	Domain	KEN domain	Interproscan
IPR025527	Conserved_site	HUWE1/REV1, ubiquitin-binding motif	Interproscan
IPR031991	Domain	DNA repair protein Rev1, C-terminal	Interproscan
IPR038401	Homologous_superfamily	Rev1, C-terminal domain superfamily	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR45990	DNA REPAIR PROTEIN REV1	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0004540	Molecular Function	RNA nuclease activity	Interproscan
GO:0006397	Biological Process	mRNA processing	Interproscan
GO:0003887	Molecular Function	DNA-directed DNA polymerase activity	Interproscan
GO:0005634	Cellular Component	nucleus	Interproscan
GO:0017125	Molecular Function	deoxycytidyl transferase activity	Interproscan
GO:0042276	Biological Process	error-prone translesion synthesis	Interproscan
GO:0070987	Biological Process	error-free translesion synthesis	Interproscan