Gene detail

Detailed information of ENSYDOP00000030924.1 in Millepora dichotoma

Genomic Location: :...
NR annotation: XP_047128873.1, uncharacterized protein LOC105846434 isoform X2 [Hydra vulgaris]

Gene Structure

More details in Jbrowse

Sequence

CDS

Transcript

ENSYDOT00000032010

GGTAAAGCAGCCATGAACTGTCATAACTGTGACGAACAGTTTGCTGAGgattctcaaatattcttttcCTATTTGTGCGAGGAGCATACCTATCTACTGATCAAGCCAGGACAAGAAGCTTCTTTTGACGAAGATAAAACGATAGTTATATTTGATGAATCAATTGGAACAAGGCAAATACAGTGTCATAAATGCAAGCTTAATTTAGGGAAGGTTTTACCATTTGGCCCGAGTAACAAATACGTTAAAGCTTTTGCCTCGACTAaggtaaaattaatttacaagaaTCACAATGGGCAGGAACCGCATAAGGTATACTCAAACTTGCCCATGAAAAGCTGTAATACAGAGGATTACTTTAAAGCTTCAGACACAAAGAAAGGTACCATTACAAAGAAAGTTATTAAGGAGCCAATAAATTTTCCCCAAATGCACACACCGGCAGATTTTGACTGGTCAACAATATCCCTTGCAAAGAATCCTTACGACTATCAAATTCAAGCTTTCGAAGAAGGACTACAGAAAAATATAGTTGTTGTATTAAACAATGGAGCTGGTAAAACATTTATTGGTTCCATGATATTGGCCAAAATGCGTCAATTAAATCCAAATCGCATGGGGCTAATGCTTGTCGATAAAGTACCTCTGGCCTCCCAACAAGGAGGCGCAATTATAGAAGACACAAAGTTATCAGTAATAAGTCTTCATGGAaggaacaagacaaaaaatagaatgaataaattaaatcttGGGTGTTATGATGCTTTAGTTGTTACGGCAGGAGcatttaatgaaatgttactaaaagAACATGTAGATGTGTCACTGTTTTGCGCTGTCATTTTTGATGAGTGtcatcatttatcaaaaaagcaTCTGTATGTTGAAATCATGAAGAAATTCCTATCGCAAGAACTGTCGCATCAGCCACGGATAATTGGCTTAACAGCATCTCCATTTGCAGGAGATGATGAagtaaaagctgaaaaaaaattaaagaaatttatcaaaacttttcccAATGCTAAAATATATTCTCCAATATTAGAACCAGCCCTTCCAACTACAAGGAAAgaattaatatcattatcaaaggACCAAAAAGACTTCATCAAAGCAGCTGTTGATGCAATTAACCAACAACTGGTTAAAATTGCTAAGGATTTTCCCCTAGAAAATAGTTGCCTAAAGACGAATTTAAGTAACAGCAGTCAGATCGTTGGGGACTTACGGTTAATTCAGAAAGATTatcctgaaaaagaaaacaacaaagattTCATGCATGTCTTATTATTGATAGATGCTTTAGaactctttatttattttgggATACCAAGTGCGTGTAAGTTCCTTGAAGGTGAAGATATGTTGGAGAAATTACCagaagaattttatcatgttacAGAAATCTCAGAGCGGTTACAAAAGTTGGAATCATACCTTAAAATTGTAAATGAAGATTCAAGAGTACTTGTATTTGTTGACAAAAGActtatagcaaaatttttaaccgAGTGGATTCGAAAGCATTTTCCAGATTTTAATGCCCAAATGGTTGTTGGGCAGCCAGGTTATGATGGAATGACATGGAAAgagcaaaaaattagaattaataatttttctgaaggaAAGTCGCGACTAACAGTAACAACCTCCGTGTTGGAAGAAGGCTTTGACGTTCCCCAGTGTGATTTAGTCGTGGCATTCACAGGGCCGCATTCTTTAATATCATTCATTCAAATGCGTGGTCGTGCACGACATCAAGATTCTGTTTTTGTTACACTCGAAGCAGAAGAATATGGGGTAAGAACGAAAGATGTTCAAAATCAAGAGAACGTAATGCGAAAGGTATTGGAAGCACACCAGAAAAGTCATTTTTCAGGACTCTCCAAGCATTAGGAAATTCAAATGTGCGTAAATATAATGAAACTGTGACAGTAATTAGCATCTGGAGGTGATAATCAACTATCAAGAGTGTTGACAAATAACTTATATTACAGTTTTTTGATTGTTTACAAtctattgatttgcagaaaaTGGACAGTCGTGTTAGAGTAAATATAAAAACCGTAAAaccataaaaatcataaaaattatgaaacctCTTAAATAATATCAGAGGTTTCTTCTTAACCCTTTTCAGGTctatgttctatttttatatcccctgaaaacataagaaactttctggttttctgactttttcaagggttaaagaaatggaacattggtcggtAATGGTTaaatatctgcaatatttttgagATCTTCAATGCTCAATGCTCATACCATCAGTTCCTTAGAGAtgacttttggattttttttgattgtaatatcAAAATAGCTGAcacatttgccaaaaattgtcaaaatacaaaagcagtcgtccagacgtgtccTATACAACTGTTTTTATAAACTGTACTAACTTCACTGGatacacctgtgtcggagtctctttcccaataaagttgcagggtatAAGCCCAGAACAGCAATTTTACGAAAAAGGGACATCGCTGCAGAAGTTTTCCcttgaagtttgtgaaatttttcaaagcagctatttTATGGAACACTTGCGATAGCGATAAGAGAGCCAGAGAATTCGACATAATCCAAACAACTTGTTTGAGACAGATTTTGTc

Protein

Uniprot

Uniprot term	Description
A1CBC9	Dicer-like protein 1 OS=Aspergillus clavatus (strain ATCC 1007 / CBS 513.65 / DSM 816 / NCTC 3887 / NRRL 1 / QM 1276 / 107) OX=344612 GN=dcl1 PE=3 SV=2
Q2VF18	Dicer-like protein 2 OS=Cryphonectria parasitica OX=5116 GN=DCL-2 PE=3 SV=1
Q2H0G2	Dicer-like protein 1 OS=Chaetomium globosum (strain ATCC 6205 / CBS 148.51 / DSM 1962 / NBRC 6347 / NRRL 1970) OX=306901 GN=DCL1 PE=3 SV=2

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF04851	ResIII	Type III restriction enzyme, res subunit	Family	Interproscan
PF00271	Helicase_C	Helicase conserved C-terminal domain	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR014001	Domain	Helicase superfamily 1/2, ATP-binding domain	Interproscan
IPR027417	Homologous_superfamily	P-loop containing nucleoside triphosphate hydrolase	Interproscan
IPR051363	Family	RIG-I-like Receptor (RLR) Helicase	Interproscan
IPR006935	Domain	Helicase/UvrB, N-terminal	Interproscan
IPR001650	Domain	Helicase, C-terminal domain-like	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR14074	HELICASE WITH DEATH DOMAIN-RELATED	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0005737	Cellular Component	cytoplasm	Interproscan
GO:0003677	Molecular Function	DNA binding	Interproscan
GO:0005524	Molecular Function	ATP binding	Interproscan
GO:0016787	Molecular Function	hydrolase activity	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
K10875	RAD54L, RAD54; DNA repair and recombination protein RAD54 and RAD54-like protein	EC:5.6.2.-	DNA repair and recombination proteins	ko03400	deepkoala