Gene detail

Detailed information of ENSYDOP00000041169.1 in Millepora dichotoma

Genomic Location: :...
NR annotation: XP_047130532.1, uncharacterized protein LOC100209849 isoform X4 [Hydra vulgaris]

Gene Structure

More details in Jbrowse

Sequence

CDS

ENSYDOT00000042638

ATGTTATTGGAAGGTATAGCCAAACCTAAATCACCAGATAAACATCTAAAGAAAAATCCAAAgtcaccaaaaaatgaaaaatctccaaacttattgaaaactgataaaaaggaAGAAACATCTCCTGAAATCACCGCAAAACCTACCCTTAGAAAAAAGTTTAGTCCGACAACTTTATCTCCAGATAAAGGTAGTCATCACCTTAAACTTCAAAAACCTTCAGCAGAACAAAGAGCAGCAAAACCAATCAcacaaattactcaaaaacatGACCCTTTAGCAGAGAAATATGATAGTAAGTCAGTCTTATCTTCTCCAAATCAAAGTGCTACAGGATCTGTCCGAAAGGaggaaaagaatttgaaagtacTCGATTGGGAAGATAGTTACTTTCGAGGCAAAAGGCGTACTTGCACACGTAGATTTAATCCAAAGGATCCTTTCAACTctttgaataaatcaaatgagGAAGCAGATATTCAAAAAGCAATCGAGTTATCACTAAGGACTGCAGAAAACGAACGCAAAAGAGTGCTGGAAGAACAACAATCTTTAGCCGCAGTTCGACCTGATATGAAGAAGAGAAGGTTCAATCGAGAAGTAGCACAGTTAACAGATACACACTGGAATGAATCAGGGTTAAGAGCCGATTGTCGCTCCCCTACCGAATCACGTAATGGCACAAGTCGCGAGGAAAGGAAATTGCACTATGCTTTGGCAAGAATAGCTGAAATGGAATACCAGGCAGAGATGAGAGCTTCACTTAAGTCGCCACCACCAGTGAAAagagtAAAAGTTGAACCCCAAAGAAAAGAATCACCTGGAAAGAAGACGCGAACTGCTTCAGTAACCGAAAAATCCAAAGgtGCAGGCAAGAAGAATATCTTAGCGTCAATCAAAAGTAACTATCGAAATAAGTCggtattaaaaacaaatcagaaaaacaaacttCTCAAGAAAGCAAAGGAAAACATAGTTAGAGCGAATATCAAGCGAAGCAATGAGAATAAATCAGTGATTGCgagtaaaaaggaaaacaagattgaTGAAAGTAAACAAGACAAAGCCAGAAGCTATAAAAGTAATGACCCAAAGAAGCTGTCTGCCACAAAGAAAACGGAAAGAAAGGGCGAGAATTCTGGTATAACCAGGAAAGTTGCAATTCCGGAGCCAGATAAATCGAAAAAGCGAGTAATTTCGGGACAACAGAGTCGAAAACATGAGTGCGCAAAAAACAGTAATCACGATACTGACGGAaatacaaAAACGACaatcaagaaattaaatgtaaaccGTGCTGCTGGTGAAACAGAGCTTCATAAGGCCGCTAGATTGGGCTACGCTGATATGGTGGAGCAGCGCATATTAGAAGGAGCTAACGTCGATGAAAGAGATAATGCAGGCTGGTCGGCGTTGCACGAGGCTTGTGCATATGGCAAAATCAATATTGTAGAACTACTTTTACGCCATGGTGCTAATCCCAACTGCTGCTCCAACTCAGGGATCAGACCTTTGCATGACGCGTGTGAGAAAGGCCATGTTGAAATTATTCGGTTATTGCTAGCGTTTGGTGCCGATCATACCATTGTAACATACGCAGGCTTCTTGCCAGTAGATTGTATCCTAGACAATAagctgaaagaatattttaaagCTTGCATTTCTGACATCGAGGCGAGTGAAATGGGGGCAAACATATCACAGcgtGGATGGGAGTTTCAAAATTCATACAGCTTACAAGGACAAAAGCAtcatttggacatttttaaagATATCCCAACCGATCCAATGTTTTCTGCTGCTTGTTTTCAAACTGGAAATAACGAAATGCCGCAAACATATTATTTGCCGTATAAAAATGAAGAAGGAGTTATAATAGGCTGTCGGAATTATTACCGTCTCAAGGATTTGCTCGATAGATTGGGCTGCTCTAGAGATTCATTTCTCAGCAAGGGTTGTCAGATTGagttgaaaaagataaaactatcaGAGTTTCATAAACTAATGGACACCAGTTGTAACACCCTCCCCTCCAGTCTACCTTCCTATAGCGCAAAAAACCGCAAGAAAGAAGTTGAACTTGTCTCTATGGGGCGTTCGACTTTTGggaaacttttcaatttaaagatgaaaagatTCGATAGGTAA

Transcript

ENSYDOT00000042638

ACGGAAAAGAAAGCAGCAGCGTATGTTATTGGAAGGTATAGCCAAACCTAAATCACCAGATAAACATCTAAAGAAAAATCCAAAgtcaccaaaaaatgaaaaatctccaaacttattgaaaactgataaaaaggaAGAAACATCTCCTGAAATCACCGCAAAACCTACCCTTAGAAAAAAGTTTAGTCCGACAACTTTATCTCCAGATAAAGGTAGTCATCACCTTAAACTTCAAAAACCTTCAGCAGAACAAAGAGCAGCAAAACCAATCAcacaaattactcaaaaacatGACCCTTTAGCAGAGAAATATGATAGTAAGTCAGTCTTATCTTCTCCAAATCAAAGTGCTACAGGATCTGTCCGAAAGGaggaaaagaatttgaaagtacTCGATTGGGAAGATAGTTACTTTCGAGGCAAAAGGCGTACTTGCACACGTAGATTTAATCCAAAGGATCCTTTCAACTctttgaataaatcaaatgagGAAGCAGATATTCAAAAAGCAATCGAGTTATCACTAAGGACTGCAGAAAACGAACGCAAAAGAGTGCTGGAAGAACAACAATCTTTAGCCGCAGTTCGACCTGATATGAAGAAGAGAAGGTTCAATCGAGAAGTAGCACAGTTAACAGATACACACTGGAATGAATCAGGGTTAAGAGCCGATTGTCGCTCCCCTACCGAATCACGTAATGGCACAAGTCGCGAGGAAAGGAAATTGCACTATGCTTTGGCAAGAATAGCTGAAATGGAATACCAGGCAGAGATGAGAGCTTCACTTAAGTCGCCACCACCAGTGAAAagagtAAAAGTTGAACCCCAAAGAAAAGAATCACCTGGAAAGAAGACGCGAACTGCTTCAGTAACCGAAAAATCCAAAGgtGCAGGCAAGAAGAATATCTTAGCGTCAATCAAAAGTAACTATCGAAATAAGTCggtattaaaaacaaatcagaaaaacaaacttCTCAAGAAAGCAAAGGAAAACATAGTTAGAGCGAATATCAAGCGAAGCAATGAGAATAAATCAGTGATTGCgagtaaaaaggaaaacaagattgaTGAAAGTAAACAAGACAAAGCCAGAAGCTATAAAAGTAATGACCCAAAGAAGCTGTCTGCCACAAAGAAAACGGAAAGAAAGGGCGAGAATTCTGGTATAACCAGGAAAGTTGCAATTCCGGAGCCAGATAAATCGAAAAAGCGAGTAATTTCGGGACAACAGAGTCGAAAACATGAGTGCGCAAAAAACAGTAATCACGATACTGACGGAaatacaaAAACGACaatcaagaaattaaatgtaaaccGTGCTGCTGGTGAAACAGAGCTTCATAAGGCCGCTAGATTGGGCTACGCTGATATGGTGGAGCAGCGCATATTAGAAGGAGCTAACGTCGATGAAAGAGATAATGCAGGCTGGTCGGCGTTGCACGAGGCTTGTGCATATGGCAAAATCAATATTGTAGAACTACTTTTACGCCATGGTGCTAATCCCAACTGCTGCTCCAACTCAGGGATCAGACCTTTGCATGACGCGTGTGAGAAAGGCCATGTTGAAATTATTCGGTTATTGCTAGCGTTTGGTGCCGATCATACCATTGTAACATACGCAGGCTTCTTGCCAGTAGATTGTATCCTAGACAATAagctgaaagaatattttaaagCTTGCATTTCTGACATCGAGGCGAGTGAAATGGGGGCAAACATATCACAGcgtGGATGGGAGTTTCAAAATTCATACAGCTTACAAGGACAAAAGCAtcatttggacatttttaaagATATCCCAACCGATCCAATGTTTTCTGCTGCTTGTTTTCAAACTGGAAATAACGAAATGCCGCAAACATATTATTTGCCGTATAAAAATGAAGAAGGAGTTATAATAGGCTGTCGGAATTATTACCGTCTCAAGGATTTGCTCGATAGATTGGGCTGCTCTAGAGATTCATTTCTCAGCAAGGGTTGTCAGATTGagttgaaaaagataaaactatcaGAGTTTCATAAACTAATGGACACCAGTTGTAACACCCTCCCCTCCAGTCTACCTTCCTATAGCGCAAAAAACCGCAAGAAAGAAGTTGAACTTGTCTCTATGGGGCGTTCGACTTTTGggaaacttttcaatttaaagatgaaaagatTCGATAGGTAACGAATCACGCAACAGTGGTTTATGGGTTTACGGAgctatgtttatatttttatgttcatttattgtaaaatattgttttgtttctaGCTTTTCTAAACTTATGCATGAAAAACGATATAACAGacgatttttatttattttgtattgtaattattacgaaaaatatttatatattataaggGTAGGACGTTATTCAGATTGACTATGGTAAGAAGAATTAGCTTGCG

Protein

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF12796	Ank_2	Ankyrin repeats (3 copies)	Repeat	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR036770	Homologous_superfamily	Ankyrin repeat-containing domain superfamily	Interproscan
IPR002110	Repeat	Ankyrin repeat	Interproscan
IPR003903	Conserved_site	Ubiquitin interacting motif	Interproscan
IPR038227	Homologous_superfamily	PCGF Ub-like fold discriminator superfamily	Interproscan
IPR047144	Family	BCL-6 corepressor-like	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR24117	AGAP007537-PB	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0005515	Molecular Function	protein binding	Interproscan
GO:0000122	Biological Process	negative regulation of transcription by RNA polymerase II	Interproscan
GO:0003714	Molecular Function	transcription corepressor activity	Interproscan
GO:0005634	Cellular Component	nucleus	Interproscan