Gene detail

Detailed information of ENSYDOP00000043329.1 in Millepora dichotoma

Genomic Location: not available for this species
NR annotation: XP_047130369.1, THO complex subunit 6 homolog isoform X3 [Hydra vulgaris]
Species abbreviation MDICH · all data for this species · gene families

Sequence

CDS

Transcript

Protein

UniProt (Swiss-Prot top hit)

No Swiss-Prot hit above the reporting threshold for this gene.

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0005827 (this species only)
Ubiquitin family	E3\|E3 adaptor Cullin RING\|CDC20 · all ubiquitin genes in this species
Ubiquitin family	E3\|E3 adaptor Cullin RING\|DWD · all ubiquitin genes in this species

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF21031 all species →	WDR54	WDR54	Repeat	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR036322 all species →	Homologous_superfamily	WD40-repeat-containing domain superfamily	Interproscan
IPR001680 all species →	Repeat	WD40 repeat	Interproscan
IPR042626 all species →	Family	THO complex subunit 6	Interproscan
IPR015943 all species →	Homologous_superfamily	WD40/YVTN repeat-like-containing domain superfamily	Interproscan
IPR049546 all species →	Repeat	WD repeat-containing protein 54-like beta-propeller	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR44411 all species →	THO COMPLEX SUBUNIT 6 HOMOLOG	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0005515 all species →	Molecular Function	protein binding	Interproscan
GO:0000346 all species →	Cellular Component	transcription export complex	Interproscan
GO:0000347 all species →	Cellular Component	THO complex	Interproscan
GO:0006406 all species →	Biological Process	mRNA export from nucleus	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

KO	Enzyme	Enzyme ID	Pathway	Map ID	Source
K13175	THOC6; THO complex subunit 6	-	Spliceosome	ko03041	deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.