Gene detail

Detailed information of ENSYDOP00000043729.1 in Millepora dichotoma

Genomic Location: :...
NR annotation: XP_047129912.1, hemicentin-2-like [Hydra vulgaris]

Gene Structure

More details in Jbrowse

Sequence

CDS

ENSYDOT00000045292

ATGCGAGAAAAGCCATTGCAAACcgataatacaaaatatatagttAACAGTATTCAAACAGAGGCAAATGACATTATCACTACCAAAAGTACATTCCAGTTACTTAATGCATCTGTAGATGATATTAGTTCTTATATTTGCCGTGCATCCAATGAGTTTGACACTGCTACGTCTTCTACTACGATCTATGTGCGATacTCACCAACAATCAGAAATTTTGGACCAGATATTGGTACCGTAGAAAACGCTGAAAACTTTCCTCTTACGTGTAACATATTTGGCGTTCCATTACCAAAAGAAATCAATTGGTACAAAGGCAACAGTACAGAAAAATTAATATCTGGCtcagaatttcaaataaataatgaaacaaaaatggcTTTAAACGATGATGAAAAGTATATCAGCAGTATATTGTCAATACGAAAAGTAACTGCTTTGCACTTTGCAAACTACACTTGTGAAGCAATAAGTGAAAGCAACGACCAAGGCGAACTAATGGCCAGAAAGACAGCAAAATTGATAGTTTCTCACAAGCCATATTTCTTGGAACCTCCTGACGAGAACTATTATGTTTCGTTATCCACAAATACTACATTAAACTGTACCGTTCAAGCTTACTTCAGGCCTACTGTCAAATGGGAAACAAACGTCACCAGAGACAGCAGGTTTATATTTCATCCCGAGCGAGTCATCATCAACGAAAATGGCCGGGGCATAGTTGAATCACAACTAACAATCACCAACTTGACGAGGCAAGATCACGGGATTTATACATGTAGAGCAAATGATTCAAAAGACACAGTAATGAGACACATAACGCTTGTTTTAAAATacttACCAATAGCTGAGAGTAAACCTAACAGCGCAATGAAAATTGAAGAATACagtattgaaaaattagaagtCAAGTTAGTTTCATATCCTGAGCCTACGATAACATGGATGCTTTCTAAAAATAATGGGGATAGTTATACTGATATTACTGGTAGAGCGCACGAAAAGTTATTAACATCAAGAAAGTTTGAAGATGTTAGACTTACAACGTTAAGATTTCCAAGTAATATTTCACGAACTGATGAAGGAATATACGTCATGAATGCTCTCcatagtttttttcattcatttactcatattttatattcatatattgCAGGGGGTCCAGTTTTTGACCCATCATCAATAAATGGAGCGATAAATGTCACAAACGGCAGTTTAGCTCTATTCCAGTGTACCGTAAGTGGTAAACCATTACCTctaatttcttggaaaaagaaTGGTGAGGATGTTACAAACTCCGAAGAAAACATTGTTGGAAATACTAGAGACCTTGAAAGATCTAAACAAAGCATTTTGAAAGTATCATCAGTTACAACAGAAGATAGTGCAACCTATACTTGTATAGCGGAAAACACTGTAGctggaaaaaggaaaagaatttCCCAAAGTCAAGTTATGAAAGTTTTATGTAGGTGTTTTGTAAGTCTAAGGATATTTAAATCAAGTGAAGGTATCTACAGATGCAACGCGATCAATAGCGAAGGTTCTAGTGCTACCGTGATCCACAATATTACTGTATTAGTGAAACCATCTTTTACTGATTTTCCGAGCTGCAAAATAGATGATATAAATTATACTTACACCTGTTACTGCAACGGTGTAGGTTATCCTTCGCCAAATGTTTACTGGACAAGACCTCCCAATAATACTATAGtatcaaatggaaaattttataatGGATCAATTACAGCTGATATATATGGTACATACCGATGTCATTTGAGCAACACACATGGAAACCTTACGGCAGATGTTCTCATCACTATTTTTGATAATCctgATTTAACTGTCACGCCATGGTCGTCATGGAGTAGCTGCAACATTTCCTGTGGTGAGGGGCACAAAAATCGCTCGCGGACGTGCCGCATTGCGAACTGTAAAGAAACAAAGTCTGATGTTAATACATATGAATTCATTATCATCTGGGTGCTTGTTCCAATCATAGTTATCCTTTTGATTATCGGTTGTGTATGGTTCTGCAGGACTAGAAGGAATTCTGACGAGGCGATTTTTGTTCCAATAAACCGTTCACTATCACAACCACCATCTGTCAGAAGCGTACAAACAAATCGAGATATTTATCTTCCAGATCAAAACAAACTAGCTGTTGTAAATAATGGTTTTGTTCTTAGTGGGCCAGACACTATTCCAATAGTTGTAGGGCCTAAAGAAACTGATACAATAGAGGtaacattgaagaaaattttcttaaatttaaagttCATTTACATATTGATTTTCTACGAAAGAGTGAGTATCATCTGGTCAAGAACTACTGGAAGttttatatcaattaaaataaacaaaaataaaaatttccgagCAAATGATTTCTCTTTTTTAGGAAGTAAAATCCTGCAATTGAAGTAA

Transcript

ENSYDOT00000045292

Protein

Uniprot

Uniprot term	Description
A1KZ92	Probable oxidoreductase PXDNL OS=Homo sapiens OX=9606 GN=PXDNL PE=1 SV=3
A2AJ76	Hemicentin-2 OS=Mus musculus OX=10090 GN=Hmcn2 PE=1 SV=1
A4IGL7	Peroxidasin OS=Xenopus tropicalis OX=8364 GN=pxdn PE=2 SV=1

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF13927	Ig_3	Immunoglobulin domain	Domain	Interproscan
PF07679	I-set	Immunoglobulin I-set domain	Domain	Interproscan
PF00090	TSP_1	Thrombospondin type 1 domain	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR036179	Homologous_superfamily	Immunoglobulin-like domain superfamily	Interproscan
IPR051170	Family	Neural and epithelial cell adhesion domain-containing protein	Interproscan
IPR007110	Domain	Immunoglobulin-like domain	Interproscan
IPR000884	Repeat	Thrombospondin type-1 (TSP1) repeat	Interproscan
IPR013783	Homologous_superfamily	Immunoglobulin-like fold	Interproscan
IPR003598	Domain	Immunoglobulin subtype 2	Interproscan
IPR036383	Homologous_superfamily	Thrombospondin type-1 (TSP1) repeat superfamily	Interproscan
IPR013098	Domain	Immunoglobulin I-set	Interproscan
IPR003599	Domain	Immunoglobulin subtype	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR12231	CTX-RELATED TYPE I TRANSMEMBRANE PROTEIN	Interproscan

Gene Ontology

GO terms	Category	Description	Source
-	-	-	-