Gene detail

Detailed information of ENSYDOP00000045341.1 in Millepora dichotoma

Genomic Location: :...
NR annotation: GCB82303.1, hypothetical protein [Scyliorhinus torazame]

Gene Structure

More details in Jbrowse

Sequence

CDS

Transcript

ENSYDOT00000046973

aGAAGACACTTGAAGTTAGGAAGCCTGTGCCACCAGTGACATGTGTTAATTCACCCTACCAGTACACCTATTCACACATTACAAGTATGACCACTTTAGGAAAAGATTACTCGCAAACGCAGGCATCTCTGGACCAACAAATAAACTATGTTTTTTCGTCATCGCAAAATAATTCAATATCAGATCCACTTCAGAGAGTAGTCGCTGGAGATGATAGGCAGATATCGAATCCGAGCTCCACCATTCAAGAACCTATATATGAAGAAATTCCTGATGGTGGATATATAAATCCAGAAATGTTAAGACGAAGTTTCAAGTCACCGTCAATGCCGCCGCCAAATAAACCTGTATTAAaaaacataTATTGTCACATTTGTGGGATAGATTGTGGAGAAATCGCAAACTTTTGCCCACAATGCGGGGCACAACTTAACCGAAATCTGAACCAGTCGATTAATACAGTACCAATATACAATCATCAAGAAGATGTTACAAGTGCTAGTCTTCCTGATAGGAACGAAGTAACTAAAAAATTTACACCAGAAAAAAGTCTCGCGCCAGAGAAAAAATCTTGGACTTGCGAAAATTGTACATTTATAAATGCTGACATAGGGACCAATATTTGTGAAATGTGTAGCAGAACTTCTGTTGggtttaaaccaatcaaaaaaacgCATGATCCAAAATTGCAGCAGCTTACAAGTCAGCAACCCATGAGcccagattttaaaaatggtgcTTACGTGGAATTTGAACCGTTTGAGTTTATGAACAgttcaaaagatgaaaaacagcagccaaatttaaacaaaaccgAAGTACCAAAAAAGAAGCAGGAGTTTGTTTATGATGAACTGgatttgaaatcagaaaaaatattaacgaaacggcaacaaatagagaaaaaaaaagctgAGGAACTTAAGGAAAAACGAGAAATGGAAATTGAACTTCAAAAAACGGAACAGCTAGTTGCGGCAATAAAGGCATGCGACAATCAAGGTTATGACCCGAAAGAATGCATATTTGCTGCTAATAAGAAAGGTTCATTTGATAGCGATGGACTAATAAAGTGGCTTGAAGATAACCGACCTGTACTAATTAACGGCTTTATTGACTACTGCTGTACGCACTATCAAGGAGAGTATGATACACTTTTAGAAGTCAAAGAAGCTCAACAAATCTTTACTGAAGCAGGAGGTGACAACAAAGAAGGTTTTGACATATTTATCAACAAGAGGCAGAACCAAATACAAGAGCTATTGGAAGACTACGACATGTTCGTTGAAAAAGATATTCTCTCAGTACTTTGTGACAATGAAGGTGATACGAGGAAAGCAAAAAATCAGTTGACAACACAACTAATATTGATGAGAGACCGCCATTTTTTTGAGGAGTTGCTACAACCACAGATTCCAAATGATGGTGAAGATGACGatgatttcactgaaattttgaTGGATGAAAGCATTTCAAATGAGctgaAGATTTACTTACTTATGGGTGAGTTCGGTTTTTCATGGGGACGTGCAGAAATGTGTTTGTCACTTATCAGAGAAGGGAAAGAAGTCATGCCTGTTGTACGTGCAGTGAAAGATTCTTATGATGTCAATCGTGTTCGTGCAAACTTGGGAAaagaatgcaaagtttgtttGCAAAGTGTCTCCATCTACGAGACTATAACATCAACATATTGTCAGTGTCAAATTTGTTGGGATTGCTACGCCAATTACTTGGAGCACCAcgtaaaaaacagtgaaattgaGGGAATGGTGTGTCCCTCTTGTGACCAACCAGAAATGCATGAACGACCCagaaattattttgagtttatagagcagcagATTATATACCTTGTGCGAGAGGAAAAGTTAGAAcagaatattttggaaatattttccgGCAAGCTTAGAGATTATTCGTTAAAGAGCGATCCAAATTTCCGCTGGTGTAAATTTTGTGAGCATGGTTTTATATGGGATGAGCCACAACGATTGCAAGCAACGTGCAATCGTTgtaataattcattttgcttCCAGTGTGGTGAAGCT

Protein

Gene family

Gene family	Subfamily
Ubiquitin Family	E3\|E3 activity\|RBR

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF16678	HOIP-UBA	HOIP UBA domain pair	Family	Interproscan
PF01485	IBR	IBR domain, a half RING-finger domain	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR013083	Homologous_superfamily	Zinc finger, RING/FYVE/PHD-type	Interproscan
IPR032065	Domain	E3 ubiquitin-protein ligase RNF31, UBA-like domain	Interproscan
IPR001841	Domain	Zinc finger, RING-type	Interproscan
IPR044066	Domain	TRIAD supradomain	Interproscan
IPR026254	Family	E3 ubiquitin-protein ligase RNF31-like	Interproscan
IPR002867	Domain	IBR domain	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR16004	RING FINGER PROTEIN 31-RELATED	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0004842	Molecular Function	ubiquitin-protein transferase activity	Interproscan
GO:0036435	Molecular Function	K48-linked polyubiquitin modification-dependent protein binding	Interproscan
GO:0061630	Molecular Function	ubiquitin protein ligase activity	Interproscan
GO:0070530	Molecular Function	K63-linked polyubiquitin modification-dependent protein binding	Interproscan
GO:0071797	Cellular Component	LUBAC complex	Interproscan
GO:0097039	Biological Process	protein linear polyubiquitination	Interproscan
GO:1990450	Molecular Function	linear polyubiquitin binding	Interproscan
GO:0008270	Molecular Function	zinc ion binding	Interproscan