Detailed information of EVM0000028.1 in Myxobolus honghuensis

Genomic Location: Contig00140:1983718...1984359
NR annotation: KAI0306614.1, ubiquitin-protein ligase [Multifurca ochricompacta]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot Gene family
Uniprot termDescription
G5ECU1Skp1-related protein OS=Caenorhabditis elegans OX=6239 GN=skr-1 PE=1 SV=1
B8MDP8E3 ubiquitin ligase complex SCF subunit sconC OS=Talaromyces stipitatus (strain ATCC 10500 / CBS 375.48 / QM 6759 / NRRL 1006) OX=441959 GN=sconC PE=3 SV=1
Q9Y709Suppressor of kinetochore protein 1 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=skp1 PE=1 SV=1
Gene familySubfamily
Ubiquitin FamilyE3|E3 adaptor Cullin RING|SKP1

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF01466Skp1Skp1 family, dimerisation domainDomainInterproscan
PF03931Skp1_POZSkp1 family, tetramerisation domainDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR001232FamilyS-phase kinase-associated protein 1-likeInterproscan
IPR011333Homologous_superfamilySKP1/BTB/POZ domain superfamilyInterproscan
IPR036296Homologous_superfamilySKP1-like, dimerisation domain superfamilyInterproscan
IPR016072DomainSKP1 component, dimerisationInterproscan
IPR016897FamilyS-phase kinase-associated protein 1Interproscan
IPR016073DomainSKP1 component, POZ domainInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR11165SKP1Interproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0006511Biological Processubiquitin-dependent protein catabolic processInterproscan
GO:0005634Cellular ComponentnucleusInterproscan
GO:0005737Cellular ComponentcytoplasmInterproscan
GO:0031146Biological ProcessSCF-dependent proteasomal ubiquitin-dependent protein catabolic processInterproscan
GO:0097602Molecular Functioncullin family protein bindingInterproscan

 KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
K03094SKP1, CBF3D; S-phase kinase-associated protein 1-Chromosome and associated proteinsko03036deepkoala

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