Gene detail

Detailed information of EVM0001123.1 in Myxobolus honghuensis

Genomic Location: Contig01049:773781...776259
NR annotation: KII69490.1, Cytoplasmic polyadenylation element-binding protein 4 [Thelohanellus kitauei]

Gene Structure

More details in Jbrowse

Sequence

CDS

Transcript

Protein

Uniprot

Uniprot term	Description
Q9VSR3	Translational regulator orb2 OS=Drosophila melanogaster OX=7227 GN=orb2 PE=1 SV=1
Q7SXN4	Cytoplasmic polyadenylation element-binding protein 4 OS=Danio rerio OX=7955 GN=cpeb4 PE=2 SV=1
Q812E0	Cytoplasmic polyadenylation element-binding protein 2 OS=Mus musculus OX=10090 GN=Cpeb2 PE=1 SV=1

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF16367	RRM_7	RNA recognition motif	Domain	Interproscan
PF00076	RRM_1	RNA recognition motif	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR035979	Homologous_superfamily	RNA-binding domain superfamily	Interproscan
IPR012677	Homologous_superfamily	Nucleotide-binding alpha-beta plait domain superfamily	Interproscan
IPR034819	Family	Cytoplasmic polyadenylation element-binding protein	Interproscan
IPR000504	Domain	RNA recognition motif domain	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR12566	CYTOPLASMIC POLYADENYLATION ELEMENT BINDING PROTEIN CPEB	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0003676	Molecular Function	nucleic acid binding	Interproscan
GO:0000900	Molecular Function	mRNA regulatory element binding translation repressor activity	Interproscan
GO:0003730	Molecular Function	mRNA 3'-UTR binding	Interproscan
GO:0005634	Cellular Component	nucleus	Interproscan
GO:0005737	Cellular Component	cytoplasm	Interproscan
GO:0006417	Biological Process	regulation of translation	Interproscan
GO:0008135	Molecular Function	translation factor activity, RNA binding	Interproscan
GO:0043005	Cellular Component	neuron projection	Interproscan
GO:0043022	Molecular Function	ribosome binding	Interproscan
GO:0045182	Molecular Function	translation regulator activity	Interproscan
GO:0045202	Cellular Component	synapse	Interproscan
GO:1990124	Cellular Component	obsolete messenger ribonucleoprotein complex	Interproscan
GO:2000766	Biological Process	negative regulation of cytoplasmic translation	Interproscan
GO:0003723	Molecular Function	RNA binding	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
K02602	CPEB, ORB; cytoplasmic polyadenylation element-binding protein	-	Messenger RNA biogenesis	ko03019	deepkoala