Gene detail

Detailed information of EVM0001171.1 in Myxobolus honghuensis

Genomic Location: Contig01049:551124...560877
NR annotation: MCK5709553.1, fatty acid oxidation complex subunit alpha FadJ [Deltaproteobacteria bacterium]

Gene Structure

More details in Jbrowse

Sequence

CDS

EVM0001171.1

ATGCTTGGAGCACCGCGCGCTAATCCAGCGTTATTTGGTTATTATTACGAAGTTCAAATTAATACCAGTCCTGAAGACTGGTTGTACTATGATAAATTGCGCGCCTCTATGGGCAAACGATATACTCCGAAAAGACAATCGGTTCGAATCGTTCAATCGGAAGGTTCAGGGATTGTCGAAATTCGATTCCGAACACTTGATTATCCCGTGAATGTTTTTTCGTTGGATTTAATCGACCGATTGTTCGAAGCTACACCACCTGGCCGATTTTCATGTCATGACAAAATATTTTTCATTTCTGACAACCCTCACTCCTTTTTTCACCGTGATGACTATGAACTTATAAGGAAAGGTTTACACTTTGATTATCGACTCTACGTTTTTTTTTATTTTTTGAAATTCGACAAAGAAGTTAATTACTACAAAAATATTGGTGTTATTGTCAATGGTCCTTGTTTAGACAGTGGCTACTCGTTTGCGCATGCTTTATTTTTTTGTCACGGCACGTATGGTTCAAATACATGTTTCGGCTACCGAAACTTCCAAAAAACGTGTTTGGTTCCTCCAGGATTGGGTGCATACAATTTCGCAACAAACAGCTCTATGTTTCTATCAGGATATGTCATAAAAGACGGCGGTTTGTTAACTTCCTCCCAACACGGTCGAATGATGGGCTACACCCTCTCCATCGACCGTAGAGCCGCACAAACAGACCAAAAAGAATTCGTTATAACTAATTTTTACGCCGAAAGATGGAAAACATTAGGCGTTCTCGGTCTCCAAGAAGCAGTTTATGATCACGATAATGTTATGCATGGACAGCAAAATATGTTAAATTATCCTGCTATCTTTCATTCAAATCGATCCAGAAATCTCTTTTATAACAGTCATTTCACATTCTACATGTATCCCGTTTTTTTATGGTCAATTTTCAAAAACCGCTATATTTTCAATACTCGTGAAAAATGGTGGCTTAGATACTTCACTATTCACTTTATCAAAATGTACCACAACTATTACGGAGAGGACGATCGGGCGGATAGTCACCATCAAAAACTTCTTAATTTCGAAAGTCTTCCTCATTATAAAGAAAATCTTCCAAACTCTTTTGCAGTTTTCGGGGACGGTTTATTACCAAGTTTAATGATTTACAAAAATTTCCTAAGAGAATTTAATTATAAAATACACTGTTATACTTCAAATATTCACCAACTTAATAAAATCGATGCAAATTTAGAAAATCTAACCGTGGATTGTCCGCACATCAATGACCATTTTAACATAGATTACGCAACAAAGATTTTATTCCCCGAAGAACGAGCTGCTCATCGTAAAAAAGATTATTTAACGCATAATAAACTTTCTTGTCAAAATCCTAAGATTATCACTCAAGATGTCGTTTTCTACTGCGGTCCCGAGAATTTCCAGGCTAAAAAAACCGCGATAAACTCGATCCAGAAATCTATTAACAAAGATCAGATAATTTTGGTTAATAATCTATCACATTGTCTTAAAGATATTTGTAATGATGAGAAAATGAAGAATGTGTTTGGTGTGAATTTCGGATTCCCGTTTTACGATTTTGATTATGTCGAAATTTCATGTCCGAATCAGAAAACGATAAATGAATTGCCTAGAGTGCTTGCAGGAACTTATCTTAATCAAATGCGTCATGTTGTGGTTGTGAAGGACTCGCCGGGGGGTGTCGCGACCAGAATTTTCCTAGCTGGATTGGAAGAATACATGTATGCCATAAAAGAAGGATGCAGCATCATTTGTTTAGATATCAGCATGAAAAGGGCTGGTTTTAAATCTATTTTTTCCAAAACTGCTGATTCGATTGGAATTGACAATATTTTGGAATCTGTAAGAAATCTATCATCTGTATTTCCAGATTATGATACTTCAATATTAGAAAGTTTGGTTGAAAAGGGAGCCATTGGAGAAAAATCCGACAAAGGTTTTTTAAAACACTCGAATTTCTCCTCTTTTTTAAATACGCATGTTTCTTTAGAATCTAAAGAATTTAAAGAGTCTAGAAAAAGAATAAAGCCATATAAAAGTCTATTAGCTTTTAATTATACATACGTTGATAGAATATTGTTAAGAATGGCTATGGAAACTATTAAATGTTTGGATGAAGGATTAGTATCTTCTGTTGAAGCTGCAGATATTGCTGCTGTCCACGGCGCCGGTTTTCCTGAAGAATTAGGTGGGCCTCTAGTGTATATTGATAAAATGAAAACTTATAAAATATATAAAAAGATGCAAAAGATATACAAATCTACTAAAAGAGATTGTTTCTTGCCGCCAAAATATTTACAAGAATGGAGATTGGAACATCGCGAATTTTTCAATTATTGA

Transcript

EVM0001171.1

Protein

Uniprot

Uniprot term	Description
B7H1I0	Fatty acid oxidation complex subunit alpha OS=Acinetobacter baumannii (strain AB307-0294) OX=557600 GN=fadB PE=3 SV=1
B7I3P1	Fatty acid oxidation complex subunit alpha OS=Acinetobacter baumannii (strain AB0057) OX=480119 GN=fadB PE=3 SV=1
B2I2J9	Fatty acid oxidation complex subunit alpha OS=Acinetobacter baumannii (strain ACICU) OX=405416 GN=fadB PE=3 SV=1

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00725	3HCDH	3-hydroxyacyl-CoA dehydrogenase, C-terminal domain	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR008927	Homologous_superfamily	6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily	Interproscan
IPR050136	Family	Fatty acid oxidation complex subunit alpha	Interproscan
IPR006108	Domain	3-hydroxyacyl-CoA dehydrogenase, C-terminal	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR43612	TRIFUNCTIONAL ENZYME SUBUNIT ALPHA	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0016507	Cellular Component	mitochondrial fatty acid beta-oxidation multienzyme complex	Interproscan
GO:0006631	Biological Process	fatty acid metabolic process	Interproscan
GO:0016491	Molecular Function	oxidoreductase activity	Interproscan
GO:0016616	Molecular Function	oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor	Interproscan