Detailed information of EVM0002613.1 in Myxobolus honghuensis

Genomic Location: Contig00656:2545704...2547085
NR annotation: KII60352.1, Transposon Tf2-6 polyprotein [Thelohanellus kitauei]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
P27980Gag-Pol polyprotein OS=Simian immunodeficiency virus agm.vervet (isolate AGM3) OX=11730 GN=gag-pol PE=3 SV=2
P05895Gag-Pol polyprotein OS=Simian immunodeficiency virus agm.vervet (isolate AGM TYO-1) OX=11731 GN=gag-pol PE=3 SV=2
P05959Gag-Pol polyprotein OS=Human immunodeficiency virus type 1 group M subtype B (isolate RF/HAT3) OX=11701 GN=gag-pol PE=1 SV=3

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF17921Integrase_H2C2Integrase zinc binding domainDomainInterproscan
PF00665rveIntegrase core domainDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR001584DomainIntegrase, catalytic coreInterproscan
IPR041588DomainIntegrase zinc-binding domainInterproscan
IPR036397Homologous_superfamilyRibonuclease H superfamilyInterproscan
IPR012337Homologous_superfamilyRibonuclease H-like superfamilyInterproscan
IPR050951FamilyRetrovirus-related Pol polyproteinInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR37984PROTEIN CBG26694Interproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0015074Biological ProcessDNA integrationInterproscan
GO:0003676Molecular Functionnucleic acid bindingInterproscan

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