Genomic Location: Contig00439:310676...317063
NR annotation: KAF0991329.1, hypothetical protein HZS_6108, partial [Henneguya salminicola]
| CDS |
| EVM0003206.1 |
| Transcript |
| EVM0003206.1 |
| Protein |
| EVM0003206.1 |
| Pfam accession | Pfam name | Description | Type | Source |
|---|---|---|---|---|
| PF04054 | Not1 | CCR4-Not complex component, Not1 | Repeat | Interproscan |
| PF16415 | CNOT1_CAF1_bind | CCR4-NOT transcription complex subunit 1 CAF1-binding domain | Repeat | Interproscan |
| PF16418 | CNOT1_HEAT | CCR4-NOT transcription complex subunit 1 HEAT repeat | Domain | Interproscan |
| PF12842 | DUF3819 | CCR4-Not complex, Not1 subunit, domain of unknown function DUF3819 | Domain | Interproscan |
| InterPro term | Type | Description | Source |
|---|---|---|---|
| IPR007196 | Domain | CCR4-Not complex component, Not1, C-terminal | Interproscan |
| IPR032191 | Domain | CCR4-NOT transcription complex subunit 1, CAF1-binding domain | Interproscan |
| IPR040398 | Family | CCR4-NOT transcription complex subunit 1 | Interproscan |
| IPR032194 | Domain | CCR4-NOT transcription complex subunit 1, HEAT repeat | Interproscan |
| IPR024557 | Domain | CCR4-NOT transcription complex subunit 1, domain 4 | Interproscan |
| PANTHER term | Description | Source |
|---|---|---|
| PTHR13162 | CCR4-NOT TRANSCRIPTION COMPLEX | Interproscan |
| GO terms | Category | Description | Source |
|---|---|---|---|
| GO:0000288 | Biological Process | nuclear-transcribed mRNA catabolic process, deadenylation-dependent decay | Interproscan |
| GO:0000932 | Cellular Component | P-body | Interproscan |
| GO:0017148 | Biological Process | negative regulation of translation | Interproscan |
| GO:0030015 | Cellular Component | CCR4-NOT core complex | Interproscan |
| GO:0060090 | Molecular Function | molecular adaptor activity | Interproscan |
