Gene detail

Detailed information of EVM0003580.1 in Myxobolus honghuensis

Genomic Location: Contig01003:1289113...1304818
NR annotation: XP_013418206.1, cytoplasmic tRNA 2-thiolation protein 1 [Lingula anatina]

Gene Structure

Sequence

Uniprot

Uniprot term	Description
O64862	Cytoplasmic tRNA 2-thiolation protein 1 OS=Arabidopsis thaliana OX=3702 GN=NCS6 PE=2 SV=2
Q94480	Cytoplasmic tRNA 2-thiolation protein 1 OS=Dictyostelium discoideum OX=44689 GN=ctu1 PE=2 SV=2
Q803X1	Cytoplasmic tRNA 2-thiolation protein 1 OS=Danio rerio OX=7955 GN=ctu1 PE=2 SV=1

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF16503	zn-ribbon_14	Zinc-ribbon	Family	Interproscan
PF01171	ATP_bind_3	PP-loop family	Family	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR000541	Family	Cytoplasmic tRNA 2-thiolation protein 1	Interproscan
IPR032442	Domain	Cytoplasmic tRNA 2-thiolation protein 1, C-terminal	Interproscan
IPR011063	Domain	tRNA(Ile)-lysidine/2-thiocytidine synthase, N-terminal	Interproscan
IPR035107	Family	tRNA thiolation protein, TtcA/Ctu1 type	Interproscan
IPR020554	Conserved_site	Uncharacterised protein family UPF0021, conserved site	Interproscan
IPR014729	Homologous_superfamily	Rossmann-like alpha/beta/alpha sandwich fold	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR11807	ATPASES OF THE PP SUPERFAMILY-RELATED	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0000049	Molecular Function	tRNA binding	Interproscan
GO:0002098	Biological Process	tRNA wobble uridine modification	Interproscan
GO:0034227	Biological Process	tRNA thio-modification	Interproscan
GO:0008033	Biological Process	tRNA processing	Interproscan
GO:0002143	Biological Process	tRNA wobble position uridine thiolation	Interproscan
GO:0002144	Cellular Component	cytosolic tRNA wobble base thiouridylase complex	Interproscan
GO:0005739	Cellular Component	mitochondrion	Interproscan