Gene detail

Detailed information of EVM0004069.1 in Myxobolus honghuensis

Genomic Location: Contig00221:2211240...2235008
NR annotation: KII73432.1, Ero1-like protein [Thelohanellus kitauei]

Gene Structure

More details in Jbrowse

Sequence

CDS

EVM0004069.1

ATGTCTCACGCAACACCCATTGTAAAAAAAGACGAAGAAACGAAAGAAGCTTTTCGAGTGGCACAAAGGGTTGACCGTGATTACGGTTTCAGTTCGCAAGGGCAAACTGGCTCGAATCATGGCCGTCCAGTACGCATGACAAGTGTCGATCGGTCTAATACTCGGGGGTTCCCGGAAAAAGTCGGTGGACAGTTTGGTGGGGATAGGAATCGCTTAACTCGCTTTAACAGAAGTTATTCCTCCTCCAGCGAAGTGCCGCCAAGAAATCTAAATCACGAAAAATTATTATTTCAGCGCGGGGAATCTGTTATCGATTTTACTGCATATGATGCGATTCCTGTACAGGTTGAAGGACCGAAAATTGACCCTATAGAAAGCTTTAAAGATATAGATTTTGGTGAAACTATAAACCTTAATATTCAGCTATGTGGATATGATAAGCCTACTCCTATCCAAAAACATTCACTTCCATATCTCATGAAAAGAAAGGATTTAATAGCATGCGCTCAAACAGGTTCCGGAAAAACTGTGGCCTTTTTATTACCTATAATTCAATCCATAAAAGATAGAGTTAACAATAGATTTTCGAATAGAAACGAACCCTATTCGTTAATACTTGCTCCCACTCGCGAACTTGTCCAACAAATTGTCACAGAAGCCAAAAAACTTATATACAGAACAAATATTAGAGTCGTTGGAATTTATGGTGGTGCCCCACATACTTCTCAACTAAAACAGATATCTTATGGCTGCCATATTATGGTAGCTACTCCCGGTCGATTAATAGATTTTATCACTTCCGGCCATTTTGAAATGCGGGATTGCAGTCATCTGATCGTCGATGAAGCCGACCGAATGCTGGATATGGGGTTTTTCCCCCAAATTAAGCAAATCCTCAATATTAGCAAAATGCCGAGTGGACCAGACAGACAGACTGTCATGTTCAGCGCAACTTTTCCCAAAGAGGTCCGAGATTTAGCCTCTAAATTATTACAAAATGAAGTCAAAATAACCGTGGGAAGTGTGGGATTCAATTGCGAACAAATTCACCAAGAAGTAATCTATATGGACCAAGATGACAAGCCTCAACGTCTTATTAATATTCTGAAAAAAATTACTGCCGAAAATGACAATGCCCAAATTTTGGTTTTTGTTGATAGAAAAAGAGTCGTGGATAAAGTGGAAATGGATTTATATAAACAGGGATTCAGAGTAGTTTCTATTCACGGAGATCGTTCGCAGAATGAGAGAAATGAGGCTTTGAATTTATTTAGAGCGAAGAAGGCACAAATTATGGTGGCTACAGATGTGGCTTCGCGAGGAATCGATATCCCTAGCGTTTCACACGTGATAAATTATTCTTTTCCGGATCAGATTGAAAATTATGTTCATAGAATAGGTCGTACGGGTAGGTGCGGAAATACAGGAACTGCCATTTCTTTTTTCACCTCCGAAGATGGTTCACAGTCAAGCCAGTTGGTTAAATTATTGAGAGAAAATAAACAGGTTATACCGGATTTTTTACATTCAATCCGACCGTTTACAAATTCCCGCCAAAATTCAAGAAAGGTTAAAAATTTGCCAAATGAAATGATATTCGAGTGGATTCAAACGATTGAATCATTTTTGAAATATATCACGAAAATCTTGCGTCAAATGATGCTTACACCCTTTTTGATATTTTCCACATTCCTAGGAATCCAATCTGCGTTTTTCGACTCGAATTTCGCGTCAGGACAAGAATGCGAATGTGTGGCTTTAAAAGAGGATTGCTGCAGTACGAAAAATATGGAAATATTTAATAATGAACACATTTTCCCAAAATTGAATGAATTGGTGGTGACAGATTATTTCAGATTCTACAAGATTAATTTAAATCGGGAATGTCTTTTTTGGCCAGACCAGAAAAAATGTTTACAGAAAAATTGTAACGTGGATCATTGTACTGAAGACGAACTTCCTCCCGCCTTTAAGAATAACAATGAGAAGGGGGACGAAACTTGTTCTAGCGGCTCGGATTTGTATCTACATAATGTGGATACTGAATTGAGTGAATCTCAACAAAAATTCGTAGAAAACTATCCATTTGATTATGAGGAATCGATTGATTTTGTGGACATCAAAGATTATATCGAACAATCCCAGTATGTTGATCTGGTTAAAAATCCTGAAAGATATACCGGATATTCTGGAAGCAGTTCTGCCAAGGTCTGGAATAGCATATTCCAAGAAAATTGCTTACAACTAAAATCTAAAATTTCCAAAACTGGAGCTGACGAGTCTTGTATAGAATTTAAAGCAAGTTCCAGACTGCTCTCTGGGTTCAGAACCAGTGTCGCTATTCACCTTAGTTCAAGATACCCTATGGAAACCTCGAAATTCGAAGTCTTCTGGGGGATAAATTACGAACAACTTCACAAAAGATTTTCGCCCGAGAACACGGGATCTAACGGTTCCCTCTGGATCAGTGACGTCTTTTTCGCATACTCCCTGGTTACTCGTGCAATTCTAAAAGCCAGACCGCTTTTAACAAACGTCGAAATTCACACTGGCGTTCTGGAGAATGATAAAAAAACAAAAGAAGTTTTAGATGAAATTTTAAAAGTCGTAGAAAAAGTGCCGGGCACTTTTAACGAACAGGTTATGTTTACTGATTTAAAAACCAACCCTGAATTATTAGATGCTATTAGGACTACTTTTAAGAATATTTCCAGAATTTTAGATTGCGTGGATTGCGATAAATGTAGACTATGGGGAAAGATTCAGATGCAAGGATATGCAACGGCTTTGAAAATCCTTTTCACTCCTTTCAATAATTCTATTCAAAAGAGTATATCTCCCGCCGTTAAATTGAATAGAATGGAAATCGTTTCTTTGATGAATTTATACACGCGTCTTTCTACTAGTTTGAATTATCTCAGCCTTTGGCGTATATACTTGGAAAAAAATTCAAAGTCAAGATCTGAACTATAG

Transcript

EVM0004069.1

Protein

Uniprot

Uniprot term	Description
O00571	ATP-dependent RNA helicase DDX3X OS=Homo sapiens OX=9606 GN=DDX3X PE=1 SV=3
P16381	Putative ATP-dependent RNA helicase Pl10 OS=Mus musculus OX=10090 GN=D1Pas1 PE=1 SV=1
O15523	ATP-dependent RNA helicase DDX3Y OS=Homo sapiens OX=9606 GN=DDX3Y PE=1 SV=2

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00270	DEAD	DEAD/DEAH box helicase	Domain	Interproscan
PF00271	Helicase_C	Helicase conserved C-terminal domain	Domain	Interproscan
PF04137	ERO1	Endoplasmic Reticulum Oxidoreductin 1 (ERO1)	Family	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR011545	Domain	DEAD/DEAH box helicase domain	Interproscan
IPR014001	Domain	Helicase superfamily 1/2, ATP-binding domain	Interproscan
IPR000629	Conserved_site	ATP-dependent RNA helicase DEAD-box, conserved site	Interproscan
IPR037192	Homologous_superfamily	ERO1-like superfamily	Interproscan
IPR001650	Domain	Helicase, C-terminal domain-like	Interproscan
IPR027417	Homologous_superfamily	P-loop containing nucleoside triphosphate hydrolase	Interproscan
IPR014014	Domain	RNA helicase, DEAD-box type, Q motif	Interproscan
IPR007266	Family	Endoplasmic reticulum oxidoreductin 1	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR47958	ATP-DEPENDENT RNA HELICASE DBP3	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0003723	Molecular Function	RNA binding	Interproscan
GO:0003724	Molecular Function	RNA helicase activity	Interproscan
GO:0003676	Molecular Function	nucleic acid binding	Interproscan
GO:0005524	Molecular Function	ATP binding	Interproscan
GO:0005783	Cellular Component	endoplasmic reticulum	Interproscan
GO:0015035	Molecular Function	protein-disulfide reductase activity	Interproscan
GO:0016972	Molecular Function	thiol oxidase activity	Interproscan
GO:0034975	Biological Process	protein folding in endoplasmic reticulum	Interproscan
GO:0071949	Molecular Function	FAD binding	Interproscan