Detailed information of EVM0004555.1 in Myxobolus honghuensis

Genomic Location: Contig01079:1039283...1041434
NR annotation: KII70001.1, Poly(U)-binding-splicing factor PUF60-B [Thelohanellus kitauei]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
Q8T6B9Poly(U)-binding-splicing factor hfp OS=Drosophila melanogaster OX=7227 GN=hfp PE=1 SV=2
Q2HJG2Poly(U)-binding-splicing factor PUF60 OS=Bos taurus OX=9913 GN=PUF60 PE=2 SV=1
Q5R469Poly(U)-binding-splicing factor PUF60 OS=Pongo abelii OX=9601 GN=PUF60 PE=2 SV=1

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00076RRM_1RNA recognition motifDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR012677Homologous_superfamilyNucleotide-binding alpha-beta plait domain superfamilyInterproscan
IPR051974FamilyPoly(U)-binding-splicing regulatorInterproscan
IPR000504DomainRNA recognition motif domainInterproscan
IPR003954DomainRNA recognition motif domain, eukaryoteInterproscan
IPR035979Homologous_superfamilyRNA-binding domain superfamilyInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR47330POLY(U)-BINDING-SPLICING FACTOR PUF60-B-RELATEDInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0000380Biological Processalternative mRNA splicing, via spliceosomeInterproscan
GO:0000381Biological Processregulation of alternative mRNA splicing, via spliceosomeInterproscan
GO:0003723Molecular FunctionRNA bindingInterproscan
GO:0006376Biological ProcessmRNA splice site recognitionInterproscan
GO:0071011Cellular Componentprecatalytic spliceosomeInterproscan
GO:0071013Cellular Componentcatalytic step 2 spliceosomeInterproscan
GO:0003676Molecular Functionnucleic acid bindingInterproscan

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