Gene detail

Detailed information of EVM0004807.1 in Myxobolus honghuensis

Genomic Location: Contig00140:1553014...1560277
NR annotation: KII65721.1, Transcriptional repressor NF-X1 [Thelohanellus kitauei]

Gene Structure

More details in Jbrowse

Sequence

CDS

EVM0004807.1

ATGCTCTTTAAAATTCCTCAGGATAGAATTTCTGATGTTTTCAGCCGAGAAACGACATGCGTTGTCTGGTTTAAAAATCCAAAAAACGACACTAATAAATTAATAAGAAAATTATGCCAAAGATATTCAACAAGCTTTTTTGGGATAATCGGACGTTTAAGATTGCCATCGATAAATAATTTTTATTTTGAGAATGATATAAATCGACGAGATCTGAATCGAATTACTAATAGGCGCACCGAAGAATTTTCTGATTTAGTTACTTCTGATGAAACACCGAAGATATTCGTTTCAGATTTACCATACATTTTCAATGAATTCCGAAATACTAATCGGATTAAAATTCAAAGAAAAAAGCGTGAAGAATATGAAAAATCGGAAGTAATCGGAATTTCGAATGCCACTTTCGTAATCTTGACTTCTATGCGAACTGTCAAAATCACAGATTTAAAAACGGGCGAAGTAAAAGAATCAAAACCCGCAAGATGGATTAATAGCGCAGATTTAAAATTTTGCATGATTTGTTTAGAAAAAATATTCGTAGATGATCGTATTTGGTGTTGCGACTATTGCCGAGCTGAAAACCATTTAAAATGTATGCGTACATGGGTCGAAAGTCGAGTTGATAAGAAAAATCAAAACGAATGGAGTTGTCCCAATTGTAGGAAAACCTATAACTCTATTTCAAATGTTTCATATTGTTATTGCAAAAAAGTTGTGGAACCAGAAAAATATGTACACGATACTTCGATCATGCCGCATTGTTGCGGTCAGACATGCGCAAGACTTTGCGAAACAACTCATGGCGTGCATTGCACTCACCCATGTGCAGTTTTATGTCACAGTGGCTTTTGTCCACCATGTAAAGAAAATTACACTTTCAATTGCTTTTGTGGTAAATCTTCTCTTAGTTGTGTTTGTTCTCAATTCAGAACTCTCCCACCAAATAAAAAATCTTGTGAAAATATTTGTGGACGTGCGCTTAACTGTGGTATCCATTTTTGTGAATCCAAATGTCATTCTGGTGAATGTGACGCATGCACGATAATTTCATCATCTATTTATTGTTATTGTGGCGCCAAAATTAAAAACTTTTTGTGTGATGGTCAAACTCATGAAGATCATTTTTCATGCCAAGATATATGCAATAAAATACTGAAATGTGGTTTACATAGATGTTTAGAAATATGTCATCCATGCAAATGTCAGCCATGTGAAACTGATATTGATGTTATTTCTTATTGTTATTGTGGAAAATCCAGTCTAGAAAGCCTAGGTATAATTAGAAATAGTTGTAACGATCCTATTCCTACATGTGACAAAATTGCGGTAAAACTCTTTCATTTAAAATGCCATTCAGGAGATTGCCCGCCATGTGAAAAAAACGCTATGGCTTTTTGTCAATGCGAAAAATCTAATATTTTAACGCCTTGCCAGAATTTGGTATCCAATACTCCTTTAAAATGTAATAAGAAATGCAAAAAATGGTTAAGTTGTAGGAAGCATAAATGCGAGAATATTTGCTGCACTTTAACAAAACACGACTGCTCAAGAATATGTTCGGAAATGGCGCCATGCGGTCTCCATACCTGTAATAAAAAATGTCACCCAGGAGACTGCGCAAAATGTACTTTTGTTTATAGCACGCGGGTTTATTGTATTTGTCGGGATTTCTTTATCGACCCACCTTATATTTGTTCTAGAATTTTCGAGTGCCAAAATTACTGCCAAGAAAATGTTCTGAGGGCCATAATGATCTTCATCAATGTCATCGTTTTGACATGCCCTGTCCTCCCTGTTAGTTGTTCTGTTCAATTCCCATTTTGTTCTTCTCCTTGTAATAAAGATTTGGAGTGCGGTCATAAATGTAACCGTTTTTGTCACTTGGGTAATTGTATAGATGAAAAGAATTCGTGCCACCAAAAATGTATAAGAATTAAGCCGAAATGTGGCCATTGTTGTAATCTCCCGTGCGGGATTAATCATAAATGTCCAGATTCTGTTTGTTCCCAGAATGTGGTGATTCGATGTCCTTGTGAATACAGGACGTATTCTGTTACTTGTGATAATTATTATTGGTTTAAGTCTTTAGTTTTACAAAAATCTGAAAAAATTCCTGAAATTTTAGAAGATCCTAAGATCTGTGTTTTGTGTGATCACGATTGCAAAATTAAGCAAAGATTATTTCAATTAGCTAATGCGTTTGGTGTAGATCCCACTACCGATCCTAGTTTAGATAGAAAAATTGTTCCAGTTACGAAGTTAACTGTGGTTATACATACACTGCGTCGTCTCAGAAAAGATAATTTTTAA

Transcript

EVM0004807.1

Protein

Uniprot

Uniprot term	Description
P53971	FKBP12-associated protein 1 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) OX=559292 GN=FAP1 PE=1 SV=1
Q54BK0	Transcriptional repressor NF-X1 homolog OS=Dictyostelium discoideum OX=44689 GN=nfx1 PE=3 SV=1

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF01422	zf-NF-X1	NF-X1 type zinc finger	Family	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR000967	Domain	Zinc finger, NF-X1-type	Interproscan
IPR034078	Family	Transcription factor NFX1 family	Interproscan
IPR011011	Homologous_superfamily	Zinc finger, FYVE/PHD-type	Interproscan
IPR001841	Domain	Zinc finger, RING-type	Interproscan
IPR019787	Domain	Zinc finger, PHD-finger	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR12360	NUCLEAR TRANSCRIPTION FACTOR, X-BOX BINDING 1 NFX1	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0005634	Cellular Component	nucleus	Interproscan
GO:0008270	Molecular Function	zinc ion binding	Interproscan
GO:0000977	Molecular Function	RNA polymerase II transcription regulatory region sequence-specific DNA binding	Interproscan
GO:0000981	Molecular Function	DNA-binding transcription factor activity, RNA polymerase II-specific	Interproscan
GO:0003700	Molecular Function	DNA-binding transcription factor activity	Interproscan
GO:0006355	Biological Process	regulation of DNA-templated transcription	Interproscan