Detailed information of EVM0004879.1 in Myxobolus honghuensis

Genomic Location: Contig00579:376345...382721
NR annotation: XP_055939689.1, 116 kDa U5 small nuclear ribonucleoprotein component-like [Argiope bruennichi]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
Q15029116 kDa U5 small nuclear ribonucleoprotein component OS=Homo sapiens OX=9606 GN=EFTUD2 PE=1 SV=1
Q5R6E0116 kDa U5 small nuclear ribonucleoprotein component OS=Pongo abelii OX=9601 GN=EFTUD2 PE=2 SV=1
O08810116 kDa U5 small nuclear ribonucleoprotein component OS=Mus musculus OX=10090 GN=Eftud2 PE=1 SV=1

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00009GTP_EFTUElongation factor Tu GTP binding domainDomainInterproscan
PF16004EFTUD2116 kDa U5 small nuclear ribonucleoprotein component N-terminusFamilyInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR000795DomainTranslational (tr)-type GTP-binding domainInterproscan
IPR005225DomainSmall GTP-binding protein domainInterproscan
IPR027417Homologous_superfamilyP-loop containing nucleoside triphosphate hydrolaseInterproscan
IPR031950Domain116kDa U5 small nuclear ribonucleoprotein component, N-terminalInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR42908TRANSLATION ELONGATION FACTOR-RELATEDInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0003924Molecular FunctionGTPase activityInterproscan
GO:0005525Molecular FunctionGTP bindingInterproscan
GO:0000398Biological ProcessmRNA splicing, via spliceosomeInterproscan
GO:0005829Cellular ComponentcytosolInterproscan
GO:0030623Molecular FunctionU5 snRNA bindingInterproscan
GO:0046540Cellular ComponentU4/U6 x U5 tri-snRNP complexInterproscan
GO:0071007Cellular ComponentU2-type catalytic step 2 spliceosomeInterproscan
GO:1990904Cellular Componentribonucleoprotein complexInterproscan

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