Genomic Location: Contig00137:2168334...2170675
NR annotation: KII63936.1, putative ATP-dependent RNA helicase DDX43 [Thelohanellus kitauei]
| CDS | |||||
| EVM0006483.1 | |||||
| Transcript |
| EVM0006483.1 |
| Protein |
| EVM0006483.1 |
| Uniprot term | Description |
|---|---|
| Q9NXZ2 | Probable ATP-dependent RNA helicase DDX43 OS=Homo sapiens OX=9606 GN=DDX43 PE=1 SV=2 |
| Q86TM3 | Probable ATP-dependent RNA helicase DDX53 OS=Homo sapiens OX=9606 GN=DDX53 PE=1 SV=3 |
| Q8W4R3 | DEAD-box ATP-dependent RNA helicase 30 OS=Arabidopsis thaliana OX=3702 GN=RH30 PE=1 SV=2 |
| Pfam accession | Pfam name | Description | Type | Source |
|---|---|---|---|---|
| PF00271 | Helicase_C | Helicase conserved C-terminal domain | Domain | Interproscan |
| PF00013 | KH_1 | KH domain | Domain | Interproscan |
| PF00098 | zf-CCHC | Zinc knuckle | Domain | Interproscan |
| PF00270 | DEAD | DEAD/DEAH box helicase | Domain | Interproscan |
| InterPro term | Type | Description | Source |
|---|---|---|---|
| IPR027417 | Homologous_superfamily | P-loop containing nucleoside triphosphate hydrolase | Interproscan |
| IPR001878 | Domain | Zinc finger, CCHC-type | Interproscan |
| IPR036612 | Homologous_superfamily | K Homology domain, type 1 superfamily | Interproscan |
| IPR001650 | Domain | Helicase, C-terminal domain-like | Interproscan |
| IPR004088 | Domain | K Homology domain, type 1 | Interproscan |
| IPR004087 | Domain | K Homology domain | Interproscan |
| IPR014001 | Domain | Helicase superfamily 1/2, ATP-binding domain | Interproscan |
| IPR000629 | Conserved_site | ATP-dependent RNA helicase DEAD-box, conserved site | Interproscan |
| IPR011545 | Domain | DEAD/DEAH box helicase domain | Interproscan |
| PANTHER term | Description | Source |
|---|---|---|
| PTHR47958 | ATP-DEPENDENT RNA HELICASE DBP3 | Interproscan |
| GO terms | Category | Description | Source |
|---|---|---|---|
| GO:0003676 | Molecular Function | nucleic acid binding | Interproscan |
| GO:0008270 | Molecular Function | zinc ion binding | Interproscan |
| GO:0003723 | Molecular Function | RNA binding | Interproscan |
| GO:0003724 | Molecular Function | RNA helicase activity | Interproscan |
| GO:0005524 | Molecular Function | ATP binding | Interproscan |
| KO | Enzyme | Enzyme ID | pathway | mapID | Source |
|---|---|---|---|---|---|
| K17043 | DDX43; ATP-dependent RNA helicase DDX43 | EC:5.6.2.7 | Spliceosome | ko03041 | deepkoala |
Maintained by Dr. Jiajie She from Prof. Longjun Wu's Lab & Prof. Pei-yuan Qian's Lab
Hong Kong Branch of the Southern Marine Science and Engineering Guangdong Laboratory (Guangzhou)
Hong Kong University of Science and Technology
Clear Water Bay, Kowloon, Hong Kong
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