Gene detail

Detailed information of EVM0006660.1 in Myxobolus honghuensis

Genomic Location: Contig00140:201276...208800
NR annotation: KII60990.1, Vacuolar protein sorting-associated protein 4B [Thelohanellus kitauei]

Gene Structure

More details in Jbrowse

Sequence

CDS

Transcript

Protein

Uniprot

Uniprot term	Description
D0FH76	Vacuolar protein sorting-associated protein 4 OS=Bombyx mori OX=7091 GN=VPS4 PE=1 SV=1
P46467	Vacuolar protein sorting-associated protein 4B OS=Mus musculus OX=10090 GN=Vps4b PE=1 SV=2
O75351	Vacuolar protein sorting-associated protein 4B OS=Homo sapiens OX=9606 GN=VPS4B PE=1 SV=2

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF04212	MIT	MIT (microtubule interacting and transport) domain	Domain	Interproscan
PF17862	AAA_lid_3	AAA+ lid domain	Domain	Interproscan
PF09336	Vps4_C	Vps4 C terminal oligomerisation domain	Domain	Interproscan
PF00004	AAA	ATPase family associated with various cellular activities (AAA)	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR007330	Domain	MIT domain	Interproscan
IPR041569	Domain	AAA ATPase, AAA+ lid domain	Interproscan
IPR015415	Domain	Spastin/Vps4, C-terminal	Interproscan
IPR050304	Family	Microtubule-severing AAA ATPase	Interproscan
IPR027417	Homologous_superfamily	P-loop containing nucleoside triphosphate hydrolase	Interproscan
IPR036181	Homologous_superfamily	MIT domain superfamily	Interproscan
IPR003959	Domain	ATPase, AAA-type, core	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR23074	AAA DOMAIN-CONTAINING	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0140603	Molecular Function	obsolete ATP hydrolysis activity	Interproscan
GO:0005524	Molecular Function	ATP binding	Interproscan
GO:0016887	Molecular Function	ATP hydrolysis activity	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
K12196	VPS4; vacuolar protein-sorting-associated protein 4	-	DNA repair and recombination proteins	ko03400	deepkoala