Detailed information of EVM0006905.1 in Myxobolus honghuensis

Genomic Location: Contig00633:2491701...2501008
NR annotation: KAF1745143.1, hypothetical protein MXB_3714, partial [Myxobolus squamalis]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot Gene family
Uniprot termDescription
Q14839Chromodomain-helicase-DNA-binding protein 4 OS=Homo sapiens OX=9606 GN=CHD4 PE=1 SV=2
Q6PDQ2Chromodomain-helicase-DNA-binding protein 4 OS=Mus musculus OX=10090 GN=Chd4 PE=1 SV=1
Q22516Chromodomain-helicase-DNA-binding protein 3 homolog OS=Caenorhabditis elegans OX=6239 GN=chd-3 PE=2 SV=2
Gene familySubfamily
Ubiquitin FamilyE3|E3 activity RING|PHD

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF08074CHDCT2CHDCT2 (NUC038) domainDomainInterproscan
PF06465DUF1087CHD subfamily II, DUF1087DomainInterproscan
PF00628PHDPHD-fingerDomainInterproscan
PF00271Helicase_CHelicase conserved C-terminal domainDomainInterproscan
PF00176SNF2-rel_domSNF2-related domainDomainInterproscan
PF00385ChromoChromo (CHRromatin Organisation MOdifier) domainDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR013083Homologous_superfamilyZinc finger, RING/FYVE/PHD-typeInterproscan
IPR019786Conserved_siteZinc finger, PHD-type, conserved siteInterproscan
IPR012957DomainCHD, C-terminal 2Interproscan
IPR009463DomainDomain of unknown function DUF1087Interproscan
IPR019787DomainZinc finger, PHD-fingerInterproscan
IPR000953DomainChromo/chromo shadow domainInterproscan
IPR016197Homologous_superfamilyChromo-like domain superfamilyInterproscan
IPR001650DomainHelicase, C-terminal domain-likeInterproscan
IPR011011Homologous_superfamilyZinc finger, FYVE/PHD-typeInterproscan
IPR049730DomainSNF2/RAD5-like, C-terminal helicase domainInterproscan
IPR000330DomainSNF2, N-terminalInterproscan
IPR001965DomainZinc finger, PHD-typeInterproscan
IPR027417Homologous_superfamilyP-loop containing nucleoside triphosphate hydrolaseInterproscan
IPR014001DomainHelicase superfamily 1/2, ATP-binding domainInterproscan
IPR038718Homologous_superfamilySNF2-like, N-terminal domain superfamilyInterproscan
IPR023780DomainChromo domainInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR45623CHROMODOMAIN-HELICASE-DNA-BINDING PROTEIN 3-RELATED-RELATEDInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0000785Cellular ComponentchromatinInterproscan
GO:0003677Molecular FunctionDNA bindingInterproscan
GO:0003682Molecular Functionchromatin bindingInterproscan
GO:0005634Cellular ComponentnucleusInterproscan
GO:0006338Biological Processchromatin remodelingInterproscan
GO:0016887Molecular FunctionATP hydrolysis activityInterproscan
GO:0042393Molecular Functionhistone bindingInterproscan
GO:0140658Molecular FunctionATP-dependent chromatin remodeler activityInterproscan
GO:0005524Molecular FunctionATP bindingInterproscan

 KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
K11643CHD4, MI2B; chromodomain-helicase-DNA-binding protein 4EC:5.6.2.-
Chromosome and associated proteinsko03036deepkoala

TOP