Genomic Location: Contig00270:2414292...2416378
NR annotation: KAF1743632.1, hypothetical protein MXB_3230, partial [Myxobolus squamalis]
| CDS |
| EVM0007912.1 |
| Transcript |
| EVM0007912.1 |
| Protein |
| EVM0007912.1 |
| Pfam accession | Pfam name | Description | Type | Source |
|---|---|---|---|---|
| PF16575 | CLP1_P | mRNA cleavage and polyadenylation factor CLP1 P-loop | Domain | Interproscan |
| InterPro term | Type | Description | Source |
|---|---|---|---|
| IPR032319 | Domain | Polyribonucleotide 5'-hydroxyl-kinase Clp1, P-loop domain | Interproscan |
| IPR027417 | Homologous_superfamily | P-loop containing nucleoside triphosphate hydrolase | Interproscan |
| IPR045116 | Family | Polyribonucleotide 5-hydroxyl-kinase Clp1/Grc3 | Interproscan |
| PANTHER term | Description | Source |
|---|---|---|
| PTHR12755 | CLEAVAGE/POLYADENYLATION FACTOR IA SUBUNIT CLP1P | Interproscan |
| GO terms | Category | Description | Source |
|---|---|---|---|
| GO:0000448 | Biological Process | cleavage in ITS2 between 5.8S rRNA and LSU-rRNA of tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA) | Interproscan |
| GO:0005634 | Cellular Component | nucleus | Interproscan |
| GO:0006396 | Biological Process | RNA processing | Interproscan |
| GO:0051731 | Molecular Function | polynucleotide 5'-hydroxyl-kinase activity | Interproscan |
| KO | Enzyme | Enzyme ID | pathway | mapID | Source |
|---|---|---|---|---|---|
| K06947 | GRC3, NOL9; polynucleotide 5'-hydroxyl-kinase GRC3/NOL9 | EC:2.7.1.- | Ribosome biogenesis | ko03009 | deepkoala |
