Detailed information of EVM0010380.1 in Myxobolus honghuensis

Genomic Location: Contig00922:976300...978238
NR annotation: KAF1742548.1, hypothetical protein MXB_1476 [Myxobolus squamalis]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
O42872Exosome complex component ski6 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=ski6 PE=2 SV=1
Q9SP08Exosome complex component RRP41 homolog OS=Arabidopsis thaliana OX=3702 GN=RRP41 PE=1 SV=1
Q921I9Exosome complex component RRP41 OS=Mus musculus OX=10090 GN=Exosc4 PE=1 SV=3

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF01138RNase_PH3' exoribonuclease family, domain 1DomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR036345Homologous_superfamilyExoribonuclease, PH domain 2 superfamilyInterproscan
IPR050080FamilyRibonuclease PHInterproscan
IPR020568Homologous_superfamilyRibosomal protein uS5 domain 2-type superfamilyInterproscan
IPR027408Homologous_superfamilyPNPase/RNase PH domain superfamilyInterproscan
IPR001247DomainExoribonuclease, phosphorolytic domain 1Interproscan

 PANTHER
PANTHER termDescriptionSource
PTHR11953EXOSOME COMPLEX COMPONENTInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0000176Cellular Componentnuclear exosome (RNase complex)Interproscan
GO:0000177Cellular Componentcytoplasmic exosome (RNase complex)Interproscan
GO:0005730Cellular ComponentnucleolusInterproscan
GO:0016075Biological ProcessrRNA catabolic processInterproscan
GO:0034427Biological Processobsolete nuclear-transcribed mRNA catabolic process, exonucleolytic, 3'-5'Interproscan
GO:0034475Biological ProcessU4 snRNA 3'-end processingInterproscan
GO:0071028Biological Processnuclear mRNA surveillanceInterproscan
GO:0071051Biological Processpoly(A)-dependent snoRNA 3'-end processingInterproscan

 KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
K11600RRP41, EXOSC4, SKI6; exosome complex component RRP41-Messenger RNA biogenesisko03019deepkoala

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