Gene detail

Detailed information of EVM0011211.1 in Myxobolus honghuensis

Genomic Location: Contig00084:29612...35593
NR annotation: XP_046854118.1, DEAD-box ATP-dependent RNA helicase 8-like [Xenia sp. Carnegie-2017]

Gene Structure

More details in Jbrowse

Sequence

CDS

Transcript

Protein

Uniprot

Uniprot term	Description
Q7XMK8	DEAD-box ATP-dependent RNA helicase 6 OS=Oryza sativa subsp. japonica OX=39947 GN=Os04g0533000 PE=2 SV=1
Q6H7S2	DEAD-box ATP-dependent RNA helicase 8 OS=Oryza sativa subsp. japonica OX=39947 GN=Os02g0641800 PE=2 SV=2
Q8RXK6	DEAD-box ATP-dependent RNA helicase 8 OS=Arabidopsis thaliana OX=3702 GN=RH8 PE=2 SV=1

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00270	DEAD	DEAD/DEAH box helicase	Domain	Interproscan
PF00271	Helicase_C	Helicase conserved C-terminal domain	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR011545	Domain	DEAD/DEAH box helicase domain	Interproscan
IPR001650	Domain	Helicase, C-terminal domain-like	Interproscan
IPR027417	Homologous_superfamily	P-loop containing nucleoside triphosphate hydrolase	Interproscan
IPR014001	Domain	Helicase superfamily 1/2, ATP-binding domain	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR47960	DEAD-BOX ATP-DEPENDENT RNA HELICASE 50	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0003676	Molecular Function	nucleic acid binding	Interproscan
GO:0005524	Molecular Function	ATP binding	Interproscan
GO:0000932	Cellular Component	P-body	Interproscan
GO:0003729	Molecular Function	mRNA binding	Interproscan
GO:0010494	Cellular Component	cytoplasmic stress granule	Interproscan
GO:0017148	Biological Process	negative regulation of translation	Interproscan
GO:0033962	Biological Process	P-body assembly	Interproscan
GO:0034063	Biological Process	stress granule assembly	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
K12614	DDX6, RCK, DHH1; ATP-dependent RNA helicase DDX6/DHH1	EC:5.6.2.7	Chromosome and associated proteins	ko03036	deepkoala