Gene detail

Detailed information of EVM0012124.1 in Myxobolus honghuensis

Genomic Location: Contig00236:509021...511225
NR annotation: KII74640.1, Long-chain-fatty-acid--CoA ligase 3 [Thelohanellus kitauei]

Gene Structure

More details in Jbrowse

Sequence

CDS

EVM0012124.1

ATGCGAAAATCCTATAAATTCCATCCCCTAAAAATCGTGGAACGATACGGTTTTTTCGATTACATTATTTGTCTAATTGCAAGGTTATATGGATTTATTTTATGCTATTTATCTAACCTGAAATATTTAACTATCACCGGTTTACCAGTTTCCAAAAATGTTTTCAGAATGGAGAGCATATGCGTCGAAGAAAACGGTTATAAAGTTTACCGCCGTCCTTGGTGCAAGCTCAAAGTCGAAGGCTCTTTTAAAGGCATGAAAACGGTCACAGAAATTATCCAAAATTTGGTAAAAACCGCACCGGACCGTGAAGTAATCGGGGTAAGACCGGTTTTAAGGGAATATAAACTCCAAGAAGGGAATAGGAGTAGAATTGTTAAGGATTTAGGCCCTTATCAATGGGTAACCTCATCACAAGTTTACGACAGAATTTTAAAAATTGCCGCGTATTTTTCGTCTTTAGGAATAAAAAAAGGTGATAATATTGTCATTTTCGCGGAAACTTCTTTAGATTATTTCGTTATTACGCAAGCTACGAATTTATTACGAGCCACTTATGCTACGATGTACCCTAACTTACCCAATGATTATATCGCGAATTGTATAGAACTTGTTGAACCGAAATTAATTTTTATAGATAGGAAATGTTATAAAAGGATTGAGACGATGATAAGTAATTTTCCACATATAAAAAATATTTTTTTGGCTACTGATTGCGATAGAGAGAATGTTGGGATTTTAGGGGATTATATTCAGTGCACAAAGATGTCCGAAATAATTTCTGGTCGTCCACCTTCCGCCAATTTTGAAAAATCGTTAGAAGAACCCCAACCTGAAGATGTTGCAACTATAATGTTCACCAGTGGTTCAACAGGGAACGCCAAAGGGGTAATAATAACCCAGATAAACATCGTCTCCCTAATAGCCGGAGTAATAGACCAGGAGTGGGTAATGAAGGAGCAGGTTTACGCGGCATATTTACCCCTTTCTCATATTTTAGAGCTTTGCTGTGAAATTTCTGCACTTTCTTATGGCGGGCAAGTGGGTTACTGCCACCCCAGTACCCTGTTTGATGAAAGTCCCATGCTATCCCCTAATAGTATAAGTGATTTAAGAGCACTTAATCCTACATCCCTTGCATCTGTTACTATGATTTTAGAAAGAATGAAAATGAAATTTTTGGAATTTCTTAAAAAGGCGCCACGTTATAAACAAATAATATTTCAAGAGTTATATAACGTCAAAGCCTCTTTCCTGGGGTATGGGTATAAAACCCCTTATCTCGACGATTACTTTTTTAAAAAATTCACAGGAATGTTTGGGAATAGGTTTAAATACAGTTTAACTGGGGGCGCTTATTTACCCCCAGAAACAGAAGAATTTTTCAATGTAGTTTATGGAGTTTTTAAACAAGCTTATGGGGCTACCGAGGTGGTGGGGTGCGGAACAATATCAAATTACGACTACACCCGACCTGGAAACGTCGGACCACCTTTTTGTTGTAGTGAAATCCGACTAATCCCATGGGAGGAAGGTGGTTACGATATGAAAGATGAGAAGTGTCCTACTGGGGAGTTATTAATCTCCGGAACATGTATAACAAAAGGATATTATAAGAATAAAAAAGCGACAGATGAGGTTTTTGAATTCGACCCTGTTACCGGGAAGACCTGGTACCATACCGAGGATATAGGTAGAGTTTTAGAAGATGGAACATTTAGAAGAAAAAGCGAAAGGGTGAAATTAAGTCATGGAGAATACGTGCAGTTAAGTAGGGTAGAGGATGTTTTAAGAAGAAGTGATATGATTGATTTTGTTTGTGTAGTTCCTAGTGAAAACAAAGATTATTTAATAGCGATTCTTTGTTTAAATAAGGAAAATGTGTTAAAATTTTCAAAATCCCATAACTTTTCACCGTCTTCTAATAATGTTGATGAATTGATTTCTAAGGATTCTTTTAAACAAATTAATTTAGATGGAAATATTAATAAATTTGAAATACCCAAAAGTTTTATCCTGACGACAGATATGTGGTCGCCAGAGGAAGGACTTTTGACACCGTCTATGAAAATTAAAAGAATCAACATCGTTAAGCGATATAAAGAACAGATAGATAAACTAAAATAG

Transcript

EVM0012124.1

Protein

Uniprot

Uniprot term	Description
Q9SJD4	Long chain acyl-CoA synthetase 8 OS=Arabidopsis thaliana OX=3702 GN=LACS8 PE=1 SV=1
O95573	Fatty acid CoA ligase Acsl3 OS=Homo sapiens OX=9606 GN=ACSL3 PE=1 SV=3
Q63151	Fatty acid CoA ligase Acsl3 OS=Rattus norvegicus OX=10116 GN=Acsl3 PE=1 SV=1

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00501	AMP-binding	AMP-binding enzyme	Family	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR042099	Homologous_superfamily	ANL, N-terminal domain	Interproscan
IPR020845	Conserved_site	AMP-binding, conserved site	Interproscan
IPR000873	Domain	AMP-dependent synthetase/ligase domain	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR43272	LONG-CHAIN-FATTY-ACID--COA LIGASE	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0004467	Molecular Function	long-chain fatty acid-CoA ligase activity	Interproscan
GO:0005783	Cellular Component	endoplasmic reticulum	Interproscan
GO:0016020	Cellular Component	membrane	Interproscan