Detailed information of EVM0014349.1 in Myxobolus honghuensis

Genomic Location: Contig00254:2053969...2060297
NR annotation: KAF0989505.1, hypothetical protein HZS_3768, partial [Henneguya salminicola]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
P51892DNA ligase 1 OS=Xenopus laevis OX=8355 GN=lig1 PE=2 SV=1
Q9W1H4DNA ligase 1 OS=Drosophila melanogaster OX=7227 GN=DNAlig1 PE=1 SV=2
P37913DNA ligase 1 OS=Mus musculus OX=10090 GN=Lig1 PE=1 SV=2

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF01068DNA_ligase_A_MATP dependent DNA ligase domainDomainInterproscan
PF04675DNA_ligase_A_NDNA ligase N terminusFamilyInterproscan
PF04679DNA_ligase_A_CATP dependent DNA ligase C terminal region FamilyInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR036599Homologous_superfamilyDNA ligase, ATP-dependent, N-terminal domain superfamilyInterproscan
IPR000977FamilyDNA ligase, ATP-dependentInterproscan
IPR012310DomainDNA ligase, ATP-dependent, centralInterproscan
IPR016059Conserved_siteDNA ligase, ATP-dependent, conserved siteInterproscan
IPR012308DomainDNA ligase, ATP-dependent, N-terminalInterproscan
IPR050191FamilyATP-dependent DNA ligaseInterproscan
IPR012309DomainDNA ligase, ATP-dependent, C-terminalInterproscan
IPR012340Homologous_superfamilyNucleic acid-binding, OB-foldInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR45674DNA LIGASE 1/3 FAMILY MEMBERInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0003677Molecular FunctionDNA bindingInterproscan
GO:0003910Molecular FunctionDNA ligase (ATP) activityInterproscan
GO:0006281Biological ProcessDNA repairInterproscan
GO:0006310Biological ProcessDNA recombinationInterproscan
GO:0005524Molecular FunctionATP bindingInterproscan
GO:0071897Biological ProcessDNA biosynthetic processInterproscan
GO:0003909Molecular FunctionDNA ligase activityInterproscan
GO:0005634Cellular ComponentnucleusInterproscan
GO:0005739Cellular ComponentmitochondrionInterproscan
GO:0006266Biological ProcessDNA ligationInterproscan
GO:0006273Biological Processlagging strand elongationInterproscan

 KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
K10747LIG1; DNA ligase 1EC:6.5.1.1
EC:6.5.1.6
EC:6.5.1.7
DNA repair and recombination proteinsko03400deepkoala

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