Gene detail

Detailed information of EVM0014870.1 in Myxobolus honghuensis

Genomic Location: Contig00111:580254...582357
NR annotation: KAF0992443.1, hypothetical protein HZS_6540 [Henneguya salminicola]

Gene Structure

More details in Jbrowse

Sequence

CDS

EVM0014870.1

ATGAAAAAAGAACGCAGTGAACGTGTTAGATTAGTTGCCACAAAAGCCATGCTAAATTCAATAGAATTTGTGAATAAAAATTTCGCTGTCGAAATTCAACGAAATTTAATCATGCAGCACGTGTGTGAATCCGCCGTTGATCCTAATCCTTCGATAAAAGTCGTCGGATTACAATGCCTGTGCCGAATAATCCAGGAATATTACGATCTTATGGAGTCTTATATGACGCAGGCGTTGTTTTCAATAACATATGACGCTATGAAATCTGATCAAGACGAGGTCGCTTTACAAGGTATCGAATTCTGGTCGACTCTTTGTGAAATCGAGGAAGAAATTGAAGAAGCTTTCGAAAATGGTGAATCTGTGCAGTTAGTTTCAAAAAAATATTGCCAAAAAGCTATACAATACATTGCGCCTTATATAATGGAAAGATTATGTCAAGATGATGAAGAAGACGACGATGATGAGGATAATTGGAATCCCCACAAATCCGCAAGCGTATGTCTTATGCTTTTAACCAAAAATTGCGTTACAGAAATTTCTAATTTAATGTTACAATTCATCGGCAATAATTACAACAGTTCTGATAAAATTCGACGGGATGCCGCCTTGGTGGCTTTGGGGTCCCTTATAGAAGCCAGTAAAGAAGATCAGGTAGATTTAATCATCCAAAATGGATATCCTATAATAATCCAACTTTGTAAAGACCCCACAACTAGGGTTAGGGATACGGCATTTTGGGCTTTAGGGAAAATTTATAGCAGACAAAATAAATTCACAGAAGATATTGAAAAAACTCTTCAGTCTATGAAAACTATTTTTGACTCGTTATCCGACTCCCCCCGAGTCGCCGTGAACGCCATTTGGGCGATGTTGTATATCGTCCGAGCAATGCACGATAATTCACGAGAAAAACTCGGTCGCCAACCAGAAACAATTTTAATTTCTAATAATTACGAGAATGTTTTAAACGCGGCATATATGACTATAAAACGCCAAGACGCAGGTCAGAGGTCTTTAAGAATTGCTGCTTTCGAATTACTAAACGCTTTAATTGAATGTCATCCCATGGATGTTCATCAATTAATTGGGCGGCATTTAGATTTCGTACTGCAACAATGTAATCAGCTTTTCTACTCGACAAATCCAGAAGCTTCTCAAACCGCCTTAAACGAGGCCACGCAGTTGCAATCGCTTTATTGTATGTCTCTCCAAAATTTCATACACGCTTTAGATCCTAGGGAAATAAATCAAGTTTCTGAACCACTTTTATTGACATTAATGAATTACGGTTCAGTGTGTAAAAAATCTACTGTTCAAGAAGATATTTTATTAACTATTGGCGTTCTCGTCCAGAAATCGCCATTTGATAAAATTTTGCCGCAATTGCCCACTTTAATTCCGATAATTCTCGGCCTATTTCAAAATTTCGACGATGTTTCTTTATGCGTCTCCTGTACTCCCTTATTGGCGATATTTCCTATAATCGCCATGGTTTTCAAATATTTATCGCTTCCAGACGTCGATATTCAACTCGAAATTCATCTACTCGTATTAGTAGGAGATTTGGCTGTGGCTGTCGGCGCGAATTTCAAACCGTTCGTTCCCGAGACTTTGGAATTGCTTAAAAAATCCACTGCACCGAATCGGAAAATCGTAAAAGCGTTTTTAACAGGATTTGAGTATTTATTCGAAGATTTCGAAGACGAGTTAAAAGCCACGTGTTTGGAGACCTATACCAGTATTATTCAGGGTGTTTATAGGAAATTGGATAGGAATGAAGATGACTATTTGATGTGGATGAATAATATCCCCTTTATCATGGCGCTTATTGATTCGATCAGTAATGACCCGAATCATAGCGACGAGGTTACCAGGTCCTGTTGTGGATTAGTGGGTGATTTGTTCCATCTTTTCCACCGCGAGTTGCAGTCGAGTATTAAGACGGAGACGATTCAGAAACTTGTTTTTGAAGCGATTAGTTCATCCGCGCCTAAAACGAAAACGGTTGGATTTTGGCTGAAAAGCATCTTGGAATCCAGCTAA

Transcript

EVM0014870.1

Protein

Uniprot

Uniprot term	Description
Q14974	Importin subunit beta-1 OS=Homo sapiens OX=9606 GN=KPNB1 PE=1 SV=2
P70168	Importin subunit beta-1 OS=Mus musculus OX=10090 GN=Kpnb1 PE=1 SV=2
P52296	Importin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Kpnb1 PE=1 SV=1

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF13513	HEAT_EZ	HEAT-like repeat	Repeat	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR040122	Family	Importin beta family	Interproscan
IPR011989	Homologous_superfamily	Armadillo-like helical	Interproscan
IPR016024	Homologous_superfamily	Armadillo-type fold	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR10527	IMPORTIN BETA	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0005634	Cellular Component	nucleus	Interproscan
GO:0005737	Cellular Component	cytoplasm	Interproscan
GO:0006606	Biological Process	protein import into nucleus	Interproscan
GO:0008139	Molecular Function	nuclear localization sequence binding	Interproscan
GO:0061608	Molecular Function	nuclear import signal receptor activity	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
K14293	KPNB1, IPO1; importin subunit beta-1	-	Chromosome and associated proteins	ko03036	deepkoala