Detailed information of EVM0015174.1 in Myxobolus honghuensis

Genomic Location: Contig00329:274373...276691
NR annotation: KII60899.1, DNA repair protein complementing XP-C cell [Thelohanellus kitauei]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
Q24595DNA repair protein complementing XP-C cells homolog OS=Drosophila melanogaster OX=7227 GN=Xpc PE=1 SV=2
Q10445DNA repair protein rhp41 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=rhp41 PE=3 SV=1
Q8W489DNA repair protein RAD4 OS=Arabidopsis thaliana OX=3702 GN=RAD4 PE=1 SV=1

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF10405BHD_3Rad4 beta-hairpin domain 3DomainInterproscan
PF03835Rad4Rad4 transglutaminase-like domainDomainInterproscan
PF10403BHD_1Rad4 beta-hairpin domain 1DomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR018328DomainRad4 beta-hairpin domain 3Interproscan
IPR018326DomainRad4 beta-hairpin domain 1Interproscan
IPR018325DomainRad4/PNGase transglutaminase-like foldInterproscan
IPR018327DomainRad4 beta-hairpin domain 2Interproscan
IPR004583FamilyDNA repair protein Rad4Interproscan
IPR036985Homologous_superfamilyTransglutaminase-like superfamilyInterproscan
IPR042488Homologous_superfamilyRad4, beta-hairpin domain 3 superfamilyInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR12135DNA REPAIR PROTEIN XP-C / RAD4Interproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0003677Molecular FunctionDNA bindingInterproscan
GO:0000111Cellular Componentnucleotide-excision repair factor 2 complexInterproscan
GO:0003684Molecular Functiondamaged DNA bindingInterproscan
GO:0003697Molecular Functionsingle-stranded DNA bindingInterproscan
GO:0005634Cellular ComponentnucleusInterproscan
GO:0005737Cellular ComponentcytoplasmInterproscan
GO:0006289Biological Processnucleotide-excision repairInterproscan
GO:0006298Biological Processmismatch repairInterproscan
GO:0071942Cellular ComponentXPC complexInterproscan

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