Gene detail

Detailed information of EVM0015394.1 in Myxobolus honghuensis

Genomic Location: Contig00317:114510...124798
NR annotation: KII66263.1, Protein argonaute-2 [Thelohanellus kitauei]

Gene Structure

More details in Jbrowse

Sequence

CDS

EVM0015394.1

ATGGGTAGAAAAGGAAAGAAAACTAAAGAAACACAGGGAGAACCGGACGAATACCCTCCACTGGAAAGCTTTCATCAGAAGACCGCTGAAAAAACACCTGAAGAAACCCGAATGCCGGTAGAATCCCCCAAAAATACCCCGCCACAAAAAAAGTCATTGGAATTCCCGCAAGTAACGACAAGAAGTCAAACCCAGAAAAAAGCGCGGTCATCTGTTTTTGTTCCGGATGTTTATCCCAAACTGGATGAAGGAGTAGAGCAGAAAAAGTCTAAAGATGTTCCAGCCTGGGATATGGCAGGCCTGAAAGAATCCGTCCCAAAACTGCCTCATGAACGTTATTCTGTTGCTCCCAGTGCTAAATTTGCTCCATCTAACCCATCTGTTACCTCTAGTGCACCCTCAAGAGGATTCAGAGTTTCAGAAGCGCCTAGAGGAGAGCGCCAAAATGATTACAATAGAGACAGGCGTAATACATATGCCCCAAGTGAGTCTAGGAGGGAAACAGGAGCATATGAAGACCGTTCTCAAGGTCGAGGTCGTGGTCGTGGTGATAATTTCAATAGAGGCGGACGAGGAAATTTCCGCGGGAATCAAGATAATCGCCAAAGATTACAGTCTGCTCCGAGAGATAATAGATCATTAGCCTATGATCAAGGAAGCTCTAGGCAAACTTCTTATCAATTAGCTGAAGCTGGATGCGTCTTTACAAATTATTATACCATCAAGATTGATAATTCCAAAAAAGTTCACGTCTACACAATAATTTCTCAACCTTCAATAAAAGAGCTTCCGACAAGATTACAAAAAGAATTGTTAAGTATTGCTTTTAACAATATTAATTCCTATTTTAAACTCCCAAATGGCGAAAAAATAGTTACAGATAAAGCGTACGAAATTTACTCCCCCAGAAAATTAGAAAACTTTTCGCAATACGCATTCACTACGGAAGGCTCAAATGGTCGTCGTGGAACGACTTCTTACACGTTTACAATAACTTTAACAAAAGAACTTTCTCCTTCAGATCTAGCTACAGAAGATAATAAAAGAATTCTAATTCAGGCATTCGAAACTATTTTTAAAAACTGTAACAAAGATTTTATCACATTCCCAAGATTTACAATTAATATTGAATCTAGTTTTAATAAAATCGATTGGTTTGAACTCTGGAAATGCGTGAAACAGCATATAATCACAAGTGAGAAAAACGTTTTTTACGTAAATATTGAAGTAGGTTACGCGGCAATTTATCCTAATTCAAAATTACATGATATAATTCATAATATGAGTAAAACTCAACAATCTATTGATCTAAGATCAAATCAAAAAGAGTCTGTTATTTTATTAACAGACATTTTTAAAGGCATACAGGTGAAACTTAATCATATTAACATGAAAAAGAAAATATTAAAGTTTTCCCGAAAAACTGCAAATAGTCATAAATTCATCTGGGAGAAAGAAGATGGGGTAAAAAAAGAAATAACTGTTGAAAAATATTTTTCGGAAAAATATAAGACAACATTAAAATACCCTGGATATCCTATGGTTAAATTACAACCTGCTAGCAAGAAAATTTATGTTCCTATTGAACTTTGTTCTGTAGAAAAATGGCAAACGATTGGTAACCGATGCGATTTAGTATCTAAAATTTCAAAATATGCTATTATGGCGCCATATGATCGTAGACGAATGACTGACGACGCACTTAATCAATCTTATTTAGATTTAAAGTCTACGCAAGTTTTGGAATCATTTGGTGTCTCTGTTGAAGCGGGAATGTGTTCAGTTGGTAAAATAGAATTCAACTCTCCTTGTATTCAATTTTCTAGGCAGTATGAAGTTTCAGACGGCCAATTTAAGTCAAATTCAGATTTTCTTTCACCTTCGAAAAATCTAAAATGTGTATACATTTCATCAAATATAAACTATATCGATGTATTTTATAATTCTTTCAGTTCTATTTCAAGAAAAAGAGGCATGAGCGTTTTTAACCGCCAAAATAGTGATAATATTGTTTATGATTTAAAAAAAGGTGTTGAAGATGTTAAAAAAATTGTCCCGAAAAGTTGTAATATCGTTTTTATAATCGAAACATATAAATTTCCTAATTATATCTATCAAGAAATAAAGCGTCTTTTCGATATAGAATTAGGAATCCCCTCACAGGTAGTGATTTTAAAAACACCTATAGATAGAGGGATATCTCCTGGAACAATGCATAATTTACTTTTAAAAATTAATGTTAAAACAGGGGGCGAAAATTTCCATTGTCTTGGGAATAATTTGAAACTTGGCGCCTTTAGTCAATCCTCTTCCCTTATGGTTATGGGGGCTGACGTTAATCATGCGCAGAGTAGCTCTAATTCGGAATGCGCCTATTCCTGTGCTTCAGTCGTTTCCTCTTTAGATAATAACTTTTGCTATTTTACAACAGAATTTGCTCTAAATAAAAGGGGTCAAGATATAATAGAAGATATGCAGGAAATTACCATAAAATGTTTGCAAAAATACAAAGATAGGAATAAAATTTACCCCCAAAAAATTGTAATGTTCCGCGATGGATTAAGCGAGGGTCAATTTATGCATAGCAGGACAGTAGAAATAACAGCTATGAAAACTGCGTTTGATAAACTTAAAATTAAACCGAAATTTACTTTTATATGCGTTCAGAAGAGGCATAATACTCGTTTTTATAGTGGTTCGCAAGATGAAAATGTTAAACCAGGAACTTTTATTCAGGATGAAAAAATCTGTCAAAATAATATGTTTTATTTATTGGCGCATAAAAATCTAAAAGGTACCGCAAAATCTGCACAGTACAAAATTTTGGTTGATGAATCTAATTCGAGCAGACAGGAAATCGCTTCGTTCGCTTATTTGCTTTCTAATAATTATTGTAGATCTTTCACTACTGTAAGTATTCCTGCCCCAACATATTACAGTCATTTAGGTGCTTTACGATCAAATTTATACAAAAATTATGTTGAAAGATGTAAAGAAGCTAGTCAACTGAAAAGAAAAATTGATAAAATGAGTAAGAATGATCCCGATTTGAAGAAAAATGTGGATCAATATTTGAGTAATCTCAAAAACAAGATATCACCTCATGCCAATCTCAATACAAGATTATTCTATGTTTAA

Transcript

EVM0015394.1

Protein

Uniprot

Uniprot term	Description
O74957	Protein argonaute OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=ago1 PE=1 SV=1
Q9VUQ5	Protein argonaute-2 OS=Drosophila melanogaster OX=7227 GN=AGO2 PE=1 SV=3
Q9SJK3	Protein argonaute 5 OS=Arabidopsis thaliana OX=3702 GN=AGO5 PE=1 SV=2

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF02170	PAZ	PAZ domain	Domain	Interproscan
PF02171	Piwi	Piwi domain	Family	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR003165	Domain	Piwi domain	Interproscan
IPR012337	Homologous_superfamily	Ribonuclease H-like superfamily	Interproscan
IPR003100	Domain	PAZ domain	Interproscan
IPR036397	Homologous_superfamily	Ribonuclease H superfamily	Interproscan
IPR036085	Homologous_superfamily	PAZ domain superfamily	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR22891	EUKARYOTIC TRANSLATION INITIATION FACTOR 2C	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0003676	Molecular Function	nucleic acid binding	Interproscan
GO:0003723	Molecular Function	RNA binding	Interproscan
GO:0005515	Molecular Function	protein binding	Interproscan
GO:0004521	Molecular Function	RNA endonuclease activity	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
K11593	ELF2C, AGO; eukaryotic translation initiation factor 2C	-	Chromosome and associated proteins	ko03036	deepkoala