Gene detail

Detailed information of FUN_000232-T1 in Acropora pulchra

Genomic Location: ntLink_6:595154...607161
NR annotation: XP_029212071.2, guanine deaminase-like [Acropora millepora]
Species abbreviation APULC · all data for this species · gene families

Gene Structure

More details in JBrowse

Sequence

CDS

Transcript

FUN_000232-T1

CCAAAGTTAGTCAGTCAGTACGTCCCTTTGGAACACCATTCCGCCATCATCACTACCCTTTATAACCCATTGGAAAGAAAGTTGTCAAATCTCTGGGATTCAAATTGTCACTATCGTTGAGCTGTTGCTTGACTCTGCTTGACTCCATGTGCGCGGGTTGTGGTGTTGTGATTGCATGTTCATCGATATTTTTTGACCTTCAGTCTCCTCTTTTAGGTGGTTTTATCTCATGATCAGACTGGTACTTCTATGTTTGTCTTCATGTGACTGGCGTAATATGATCGGCATTGCAAATCGTAGGCAGGTTTGTCGTATTCAGTAGTTCAAGAGTTGAGAGTACCGCAGCGGAAGCTTTGCATCATGAAATTTGTATTTTGTGGAACGCTTGTTCATTCGACTCCGGAGAGAGTGATGGAAGTGTTACATGACAGGATAATGGGGATTGATTTGAATGGAAAGATAGCATTTTTAGAGAATAGATCCAAACTTCATGAACTTGCCCAGAAATTTGGATTTGAAACAAAAGATGTGATAAATCTCAAACCAAGGAGTCAGTTTTTGATTCCTGGTTTTGTTGACACTCATATCCATGCTCCACAGTATGTGTTTACTGGGACAGGCTATGATGTACCTCTTCTTCAATGGCTTGAAAAGTACACTTTTCCTGTGGAATCAAAATTTAAATGTACAAAGTATGCTGAACATGCATATAAAAAAGTTGTGGCTAGACTTCTTAAGAATGGGACCACGACAGCTTCCTATTTTGCCTCCATTCACCTTGAAGCTACAAATGTCCTCTGTGATGTTGTTGCTGAACTTGGTCAAAGAGGTTACATTGGTAAAGTTAGTATGGATCAAAACAGTCCTGATTATTATGTGGAAACAACACAGAAAGCCATTGAAGATGCTGAAAGATTTGTGAAGCATGTTTTGGAACTCAAGAACGCCTTAATTACTCCTGTAGTGACTCCAAGATTTGTGCTTTCTTGTACAGCACACTTGTTGAAACAATTAGGAGATGTTGCTATGAAATATGACGTTCCCATCCAGAGTCACTTAAATGAGACAAAGAATGAAATACAAATGGTGAAGAAAAGCTTTTCAGATGATACTTATACTGCAGTCTATGATAAGCACAATTTACTGAACAGCAAGACATATATGGCTCATTGCTGTCATTCATCTGAAGAAGAACTCTGTCTCATGGTGAAGAAAGGTTCAGGCGTTGCACACTGTCCGACTTCCAACTTCAATATTAGAAGTGGTATTGCTGATGTTAGAGCAATGCTCGATAAGAAGATAAAAGTTGGTCTTGGAACAGATGTATCTGGTGGTGAATCAACGTCCATACTAGTTGCCATTCGTGACTGCATCAAAGCCTCAAATGTGTTGAGTTTAAGAAAACCTGAAGAATACAAACCATTGAATTTTGAAGAAGCATTTTTTCTAGCTACTCTTGGTGGAAGTCAAGTTTTGGGACTTGATGGCAAAATTGGAAATTTTGAGGTCGGTAAAGATTTTGATGCGCTATTGATCGATGTAGAGGCGCAGAATTCAGCATTTGATTGCTTTGACAGAGACAATACTATGGATGTCATACAGAAGTTTCTTATGCTTGGTGATGATCGAAACATCCTGAAAGTTTTTGTTGCTGGTAGAGTTGTATGCGGACAAGATTGACACTCGAAGCCATTCCATTGGCGGAATGAAGGTCTTCCGTGATGCATTCACTGCATCATGCCTTCGCTATATCAAGCGATTTTCAAAATGAGGGCGTTTTTAGCCGACTCCGAAATGAAAGTTATCATCTGATTAAATGAAGTGAAATGATGGGAGCTCTGTAATCTCTGGATGACAAAGGGTTTCAGTTACGAATGGAAACGAGTCCTTTTAATCCAGGCTTAGGATCAGTTTTATTGAAATAACATCATCGCGTTTTCTCGGCTTAGCAAGAAACTTTGTTACATTGGACATTGAATTAATTTCTTGATTGATCAGTGAAGTGAGAACGAAAAATATGGCCGATGCCATTAACACTTGAGAATTTTCCCGTGCATCTCCTGAATTTGCTGAGAATGTCAATAAAAAACAAAATTAGTTGAAATATT

Protein

UniProt (Swiss-Prot top hit)

UniProt accession	Description
Q9R111	Guanine deaminase OS=Mus musculus OX=10090 GN=Gda PE=1 SV=1
Q9WTT6	Guanine deaminase OS=Rattus norvegicus OX=10116 GN=Gda PE=1 SV=1
Q86AW9	Guanine deaminase OS=Dictyostelium discoideum OX=44689 GN=guaD PE=1 SV=1

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0004621 (this species only)

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF01979 all species →	Amidohydro_1	Amidohydrolase family	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR006680 all species →	Domain	Amidohydrolase-related	Interproscan
IPR032466 all species →	Homologous_superfamily	Metal-dependent hydrolase	Interproscan
IPR014311 all species →	Family	Guanine deaminase	Interproscan
IPR011059 all species →	Homologous_superfamily	Metal-dependent hydrolase, composite domain superfamily	Interproscan
IPR051607 all species →	Family	Metallo-dependent Hydrolases	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR11271 all species →	GUANINE DEAMINASE	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0016787 all species →	Molecular Function	hydrolase activity	Interproscan
GO:0006147 all species →	Biological Process	guanine catabolic process	Interproscan
GO:0008270 all species →	Molecular Function	zinc ion binding	Interproscan
GO:0008892 all species →	Molecular Function	guanine deaminase activity	Interproscan
GO:0016810 all species →	Molecular Function	hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds	Interproscan
GO:0005829 all species →	Cellular Component	cytosol	Interproscan
GO:0019239 all species →	Molecular Function	deaminase activity	Interproscan
GO:0046098 all species →	Biological Process	guanine metabolic process	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

KO	Enzyme	Enzyme ID	Pathway	Map ID	Source
K01487	guaD, GDA; guanine deaminase	EC:3.5.4.3	Purine metabolism	ko00230	deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.