Genomic Location: contig_1:3071583...3099543
NR annotation: XP_020604631.1, uncharacterized protein LOC110043506 [Orbicella faveolata]
| CDS | |||||
| FUN_000243-T1 | |||||
| Transcript |
| FUN_000243-T1 |
| Protein |
| FUN_000243-T1 |
| Uniprot term | Description | ||||
|---|---|---|---|---|---|
| Q9BYK8 | 3'-5' exoribonuclease HELZ2 OS=Homo sapiens OX=9606 GN=HELZ2 PE=1 SV=7 | ||||
| E9QAM5 | 3'-5' exoribonuclease HELZ2 OS=Mus musculus OX=10090 GN=Helz2 PE=1 SV=1 | ||||
| P42694 | Probable helicase with zinc finger domain OS=Homo sapiens OX=9606 GN=HELZ PE=1 SV=2 |
| Gene family | Subfamily |
|---|---|
| Transcription Factors Family | zf-CCCH |
| Pfam accession | Pfam name | Description | Type | Source |
|---|---|---|---|---|
| PF00642 | zf-CCCH | Zinc finger C-x8-C-x5-C-x3-H type (and similar) | Family | Interproscan |
| PF13086 | AAA_11 | AAA domain | Domain | Interproscan |
| PF13087 | AAA_12 | AAA domain | Domain | Interproscan |
| PF00773 | RNB | RNB domain | Domain | Interproscan |
| InterPro term | Type | Description | Source |
|---|---|---|---|
| IPR027417 | Homologous_superfamily | P-loop containing nucleoside triphosphate hydrolase | Interproscan |
| IPR000571 | Domain | Zinc finger, CCCH-type | Interproscan |
| IPR036855 | Homologous_superfamily | Zinc finger, CCCH-type superfamily | Interproscan |
| IPR041677 | Domain | DNA2/NAM7 helicase, helicase domain | Interproscan |
| IPR001900 | Domain | Ribonuclease II/R | Interproscan |
| IPR047187 | Domain | Upf1-like, C-terminal helicase domain | Interproscan |
| IPR012340 | Homologous_superfamily | Nucleic acid-binding, OB-fold | Interproscan |
| IPR050534 | Family | Coronaviruses polyprotein 1ab | Interproscan |
| IPR041679 | Domain | DNA2/NAM7 helicase-like, C-terminal | Interproscan |
| PANTHER term | Description | Source |
|---|---|---|
| PTHR43788 | DNA2/NAM7 HELICASE FAMILY MEMBER | Interproscan |
| GO terms | Category | Description | Source |
|---|---|---|---|
| GO:0046872 | Molecular Function | metal ion binding | Interproscan |
| GO:0004386 | Molecular Function | helicase activity | Interproscan |
| GO:0003723 | Molecular Function | RNA binding | Interproscan |
| GO:0004540 | Molecular Function | RNA nuclease activity | Interproscan |
| GO:0043139 | Molecular Function | 5'-3' DNA helicase activity | Interproscan |
| KO | Enzyme | Enzyme ID | pathway | mapID | Source |
|---|---|---|---|---|---|
| K25165 | HELZ2; 3'-5' exoribonuclease HELZ2 | EC:3.1.13.1 EC:5.6.2.6 | Messenger RNA biogenesis | ko03019 | deepkoala |
Maintained by Dr. Jiajie She from Prof. Longjun Wu's Lab & Prof. Pei-yuan Qian's Lab
Hong Kong Branch of the Southern Marine Science and Engineering Guangdong Laboratory (Guangzhou)
Hong Kong University of Science and Technology
Clear Water Bay, Kowloon, Hong Kong
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