Gene detail

Detailed information of FUN_000298-T1 in Colpophyllia natans

Genomic Location: contig_1:3873042...3903445
NR annotation: XP_020611938.1, uncharacterized protein LOC110050360 isoform X2 [Orbicella faveolata]

Gene Structure

More details in Jbrowse

Sequence

CDS

FUN_000298-T1

ATGGATTTGAGGTCCACCCCTTCTAGAGGACGTGCTGATGGGACACTCGTTATTAAGGGAAAGGCATTTAATTGCTATATGGAGGATTTCAAATTGTTAGATAAGCTCTTTATAGCCCTTTCTGATTCTATAAACCAGATGATACATAAACCCACCGGCCACATTATGACAGTCCAGGTTTTGCATGTTTCCTCCACAAATGAGCGGAAGATGTTTTTAAACGCTTTGAATGACTTTGTGGTGCGCAATGTAGACTGGTCACACATCGTGACTGTTTATGGTGTTATGGCTAAAGAGGAAAAAGTTTGGATCTGTATGGAGCCCATGAGAGCAACAATATTGCATTTGTTTGTTATACTGGGCTCCAGAAGGATACCTGAGGAGGTCCTTCGAGAAATGGCCATTGCCGTACTTCGTGCCTTAAACGATCTACAAAATGTGAGCATCCCACACGGAGATGTGTGGCTGGACAGTATTTTAGTGGATGACAAAGCAAATTTCAAGTTCTCTTTTGTACCTGATACACGAGACCATAGGTTTTTTGATGTTCAGACTGAAACCAAGATACGGAGTCTAGGAAGAGTCCTGACATCGCTTGCAACAGGCACACTCCAAGACATTCACCCTGCTGATGTTCCATGCTCAGATGAATTTAGAGATTTTGTTGCTCAgtgCTACAGTCCAGGAGACTATTATGAAAGACCGAGCTATGCTTTGTTCTTGGAACATGCGTTCATAAAAGGAAGCAACGAACAGAGCCGTTTTGACAGCAAACGTTGGCTAACAACTTTTCTCCAAGAACTGGAACAGGACCGGAAATTTACTGTACCTCCAGAGATTACGTCACGAGGACATTTGGCTTTGGCAGCCTACAAAGAGGCCCTTGCTGAAGGAAAGACTTTCGACAAAAGGGTACCGGTCATGTTGATTGGACAGGACAGGTCAGGAAagaccagcttaaagaagtcactcaGGGGAGAGCGTTTCAACCCAGATGAAGAGAGAACTGTAGGCATAGATGTTGATCCCtctcatttcaaattatcaactgagATTTGGAAGATAGGGACGAAGGATCAAGAAACAAATTCGGAGAGGTCTATTTCCTATGAGTACCATGCAGCGCGAGCAACTGGTAAAAATTTGAAGGAGGAAGAAAAGGTTCCCGGCTCCGTGGAATGGGTTCCAGAGACCAAACAGTCTGGAAACATTCCTGTAGTTGAACAAGTCGCCACTGCAGTATCTTTACCAAACGTAGTAAGACAAGACGCCAGGTCTGATGAGATGTCAAACGATCCAGAATCTGTTCTGCACTCCCGATATCCTGAACAAGATGACAACATACCAAAAGATGTAGAAACCGAGATTGTacagcgactgaaaaacgagggtaaagtggaagacgaagatgtacattccgttttgtgggattttgctggacaatcagtttactatacaacacacccactttttctcacttcaagaggaatttatcttttagtttaTGACCTCAGCCAAAATCCCCTTGAAAAGGCGAAACCTGTTGTGAAGCAAGGATTCTACAGGAAGCTACTAGACAACTTTAGTTTCAAaactaactttgattatttGGATTTTTGGATGTCTTCGATTGCTTCTCTGGCGAGCGAAGAAAAAAGTGATCAGGAAAGTGTTGAGTCTGGGGTGTTACCAGAGAAACTTCCCGCAGTTTTCTTAGTGTGTAGCCATGCTGATACACCATACAAACGCCAGTCTGATCCAACTACACTAGCCAGGGAGTTATTTGGGTCTCTGCGGACTAAACCATACAAAAGCCACCTGTATGATGTCTTcgttgtggataacactatgTCAGGTCATGGTTGTGAGTGTCCAGAAGTCGTGCGGCTGCGAGAAGAAGTACTTGCTGTCTCAAAAGCGCTGCCTCAAATGAAAGAAGCCATTCCaatcaaatggctaaaatatgaGAAGGACCTCCAGGCCATGAAGGAAGGTGATACGAAATGGATAGGCCGTGACGCAGCAAAAACAATCGCATGTGAAGCATGTGATATTGATGATCAAGAATTCCAGACGgttcttaattttttacatgacaagagaattttgattctGGATAAATTGGTGGTCTTGGACCCGCAGTGGTTGATTGACGTGTTTAAAGAGGTGATAACCGTCAGGCCTTACAACCTTGAGGAGAAGAAATTTGAAGCACTTTGGGATAAGCTTGAGAAAAATGGGATCCTGCACGAAAAACTTTTAGAACATGTTTGGGCTCCTTTATTGGACCACAAAGAAACCTTTGAGAGTCTTATCGCGATCATGGAGAGATTTAGCTTGGTTTGTTCTTGGCCTTCATCCGATGCCTCTTGTAGTAAGCAGTACCTGGTACCGTCCATGTTGATGTCACATCCACCCGAGGACATAATGAGCTTGGTTGCATCAGCGCGTATTCCCccactttttattaaatttgaatCTGGTCAAGTTCCGCCTGGCTTGTTTCCCCGACTTGTGCTGCAGTTCTTTCAGTGGGATCAAGAAGGACAAGGGAAGCCGCAACTGTACCACAACTTCGCCAGATTTTACACCTCTCAAAATGAAGACTGCTCCGTAATCCTTCTGTGCCATTCATTTTCCAttgaagttgttgttcaccaagAGACGAGTCAAGAGTTGGCAGAGAGTCTACAATCAAAGCTCTCTTGTTCTGCAGATGCCAGCTATGACACGTGTGAAGTGGCATGTGCTCGTGCAGTTCGTAGGCAGCTGGGATTGATACTTGAGTCCATTCGAAATGAGTTCTGTTGGctgaagaatatgaaatatgaagtCACCTTCATCTGCCCAGTCTGTTGTCAAGAAGGTGCGCTCAAATTCTGTCGCATACATGCTACACAAGGTTGCAAGCTTGAGGAATGCCTGCACTTCTGGTCTGAGTCTCAGTTGTGTAATGTCAATGTCAATCGTTGCGACAAATCAGCAACTGCACGGAATAACAGAGTTGACCTGAAGCAGTTCGCGCCATGGTTTGCCCCTCAACAAAGTCAGATGGCAGTTGATAAGCATAGTGGGGGAACTTTGGCCAATATGCAAGAAAGCAAAGCAATTGCCCTTCCTTGTGAGGTTCAAGAATCCCTTTTGTGCCAGACGTCTGATGCCAGAGAAGTTGTTCGTCAACTACAAGAGACTCTGCAGCCGGATCAAGCTTCTCTGCAAGAGGCAGGACCTGAAACCAGGCAAATGATCCGTTGTCTAGCAAGGACAGCTAAAGATTCAAACAGGCTTGATGTGTTTGAACATTTGAGAGAGATTACACCAGCTGGAACGAGTGGTCCTCGGATGTCTGAACACCTCGATGTCCGAAATGTCCCTGTTTCCAAGAGAAGAGACCTCACAGTTGATTTGTGTGGTGGAGAAGAGTGGAAAGTGGTTGCTGAGGCGCTGGGCCTCACCACACAAGAGATTCGTTTCCTTGACCACCGTACTTTGAACCCACTTGACTCAGCCCTGGCTTTCATTGCTAAGCAGCGCCACATTACTGTGGGAGAATTGTACGACATAATAAGTGAATGTGGCTTTCCTGCGGTAGCTGACCTTAGGTTATAA

Transcript

FUN_000298-T1

Protein

Uniprot

Uniprot term	Description
O09110	Dual specificity mitogen-activated protein kinase kinase 3 OS=Mus musculus OX=10090 GN=Map2k3 PE=1 SV=2
Q1ZXD6	Probable serine/threonine-protein kinase roco5 OS=Dictyostelium discoideum OX=44689 GN=roco5 PE=3 SV=1
Q90891	Dual specificity mitogen-activated protein kinase kinase 2 OS=Gallus gallus OX=9031 GN=MAP2K2 PE=2 SV=1

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00069	Pkinase	Protein kinase domain	Domain	Interproscan
PF16095	COR	C-terminal of Roc, COR, domain	Family	Interproscan
PF08477	Roc	Ras of Complex, Roc, domain of DAPkinase	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR027417	Homologous_superfamily	P-loop containing nucleoside triphosphate hydrolase	Interproscan
IPR000719	Domain	Protein kinase domain	Interproscan
IPR032171	Domain	C-terminal of Roc (COR) domain	Interproscan
IPR036388	Homologous_superfamily	Winged helix-like DNA-binding domain superfamily	Interproscan
IPR052468	Family	Dual specificity MAP kinase kinase	Interproscan
IPR011009	Homologous_superfamily	Protein kinase-like domain superfamily	Interproscan
IPR011029	Homologous_superfamily	Death-like domain superfamily	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR47238	MITOGEN-ACTIVATED PROTEIN KINASE KINASE 5	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0004672	Molecular Function	protein kinase activity	Interproscan
GO:0005524	Molecular Function	ATP binding	Interproscan
GO:0006468	Biological Process	protein phosphorylation	Interproscan